RNA–Protein interactions for RNA: ENST00000582933.5

PPP4R1-223, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-223ENST00000582933 A0A0U1RQF3 1178 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 LINC01553A4QN01 128 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 INO80B-WBP1J3KQ70 363 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 B4GALT5O43286 388 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 PRPF40AO75400 957 aaKnown RBP6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 STAG3L1P0CL83 205 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 TROVE2P10155 538 aaKnown RBP eCLIP6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 PLS3P13797 630 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 FERP16591 822 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 ATF7P17544 494 aaPredicted RBP6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 CD9P21926 228 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 HOXA11P31270 313 aaPredicted RBP6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 STAT6P42226 847 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 NPTX2P47972 431 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 FAM189BP81408 668 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 ITIH3Q06033 890 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 FAM187BQ17R55 369 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 KLHL40Q2TBA0 621 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 CCDC38Q502W7 563 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 ARSHQ5FYA8 562 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 RESP18Q5W5W9 173 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 KAZNQ674X7 775 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 THOC7Q6I9Y2 204 aaKnown RBP6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 TWF2Q6IBS0 349 aaKnown RBP6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 IRGCQ6NXR0 463 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 FAM117BQ6P1L5 589 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 NOTUMQ6P988 496 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 SHC4Q6S5L8 630 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 FIP1L1Q6UN15 594 aaKnown RBP6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 Q7L0L9 218 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 ECHDC2Q86YB7 292 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 ZBTB8OSQ8IWT0 167 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 CMTR2Q8IYT2 770 aaKnown RBP6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 CHPFQ8IZ52 775 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 DEPTORQ8TB45 409 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 TRPC4APQ8TEL6 797 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 ZNF689Q96CS4 500 aaPredicted RBP6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 CHAMP1Q96JM3 812 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 KIFC3Q9BVG8 833 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 SCAND2PQ9GZW5 306 aaPredicted RBP6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 ZNF576Q9H609 170 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 ELAC1Q9H777 363 aaKnown RBP6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 SLC28A3Q9HAS3 691 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 KMT5AQ9NQR1 393 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 PRMT7Q9NVM4 692 aaPredicted RBP6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 TMEM161AQ9NX61 479 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 ARHGAP28Q9P2N2 729 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 TUBGCP4Q9UGJ1 667 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 RCOR1Q9UKL0 485 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 PAIP2BQ9ULR5 123 aaKnown RBP6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 MAPK8IP1Q9UQF2 711 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 EYSQ5T1H1 3165 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 ZMYM2Q9UBW7 1377 aa6.54□□□□□ -1.36
PPP4R1-223ENST00000582933 COL6A3P12111 3177 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 PTPRSQ13332 1948 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 MYH15Q9Y2K3 1946 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 DGKIO75912 1065 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 UPP2O95045 317 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 LDHAP00338 332 aaKnown RBP6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 PRKCBP05771 671 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 LINC00271P0C7V0 271 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 FGFR1P11362 822 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 ARF4P18085 180 aaPredicted RBP6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 BTF3P20290 206 aaKnown RBP6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 AXLP30530 894 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 FNTAP49354 379 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 CLCN2P51788 898 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 PEX3P56589 373 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 PHEXP78562 749 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 PPIDQ08752 370 aaKnown RBP6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 DMPKQ09013 629 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 DYNC1I2Q13409 638 aaKnown RBP6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 CUL3Q13618 768 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 BTG3Q14201 252 aaPredicted RBP6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 MAP7Q14244 749 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 SKIV2LQ15477 1246 aaKnown RBP6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 MAPK6Q16659 721 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 RRAGBQ5VZM2 374 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 NXNQ6DKJ4 435 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 BEND5Q7L4P6 421 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 TMC6Q7Z403 805 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 ZNF598Q86UK7 904 aaKnown RBP6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 HOOK3Q86VS8 718 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 LRRC43Q8N309 656 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 MAGEC3Q8TD91 643 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 HELQQ8TDG4 1101 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 ZNF75CPQ92670 426 aaPredicted RBP6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 CLP1Q92989 425 aaKnown RBP6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 HPS3Q969F9 1004 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 CABS1Q96KC9 395 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 GUCD1Q96NT3 240 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 TGS1Q96RS0 853 aaKnown RBP6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 PYM1Q9BRP8 204 aaKnown RBP6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 ABCG4Q9H172 646 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 SEMA6BQ9H3T3 888 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 FZD8Q9H461 694 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 CUEDC2Q9H467 287 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 MAGEF1Q9HAY2 307 aa6.53□□□□□ -1.36
PPP4R1-223ENST00000582933 PARVGQ9HBI0 331 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms