RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 CES2O00748 559 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 CALCAP01258 141 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 COMTP21964 271 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 KCNJ1P48048 391 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 VPS41P49754 854 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 RARRES1P49788 294 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 ZNF844Q08AG5 666 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 PPP1R7Q15435 360 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 UAP1Q16222 522 aaPredicted RBP5.72□□□□□ -1.49
VAPA-203ENST00000577539 PTGISQ16647 500 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 NBPF9Q3BBW0 867 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 ARHGEF16Q5VV41 709 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 TRIM46Q7Z4K8 759 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 CPLX4Q7Z7G2 160 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 TRIM42Q8IWZ5 723 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 MREGQ8N565 214 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 PRPF38AQ8NAV1 312 aaKnown RBP5.72□□□□□ -1.49
VAPA-203ENST00000577539 SH3TC2Q8TF17 1288 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 POMGNT1Q8WZA1 660 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 FIZ1Q96SL8 496 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 RMDN3Q96TC7 470 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 ERVK-5Q9HDB9 667 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 TOPORSQ9NS56 1045 aaPredicted RBP5.72□□□□□ -1.49
VAPA-203ENST00000577539 COG5Q9UP83 839 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 ADAMTSL1Q8N6G6 1762 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 EP400Q96L91 3159 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 MYO1FO00160 1098 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 PLS3P13797 630 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 ZNF131P52739 623 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 RPS6P62753 249 aaKnown RBP5.72□□□□□ -1.49
VAPA-203ENST00000577539 PTPN11Q06124 597 aaPredicted RBP5.72□□□□□ -1.49
VAPA-203ENST00000577539 SFSWAPQ12872 951 aaKnown RBP5.72□□□□□ -1.49
VAPA-203ENST00000577539 MAPK7Q13164 816 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 ITGB3BPQ13352 177 aaPredicted RBP5.72□□□□□ -1.49
VAPA-203ENST00000577539 CAMK2GQ13555 558 aaPredicted RBP5.72□□□□□ -1.49
VAPA-203ENST00000577539 SNX1Q13596 522 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 DENND2CQ68D51 928 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 LMBRD2Q68DH5 695 aaPredicted RBP5.72□□□□□ -1.49
VAPA-203ENST00000577539 SLFN11Q7Z7L1 901 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 NLRX1Q86UT6 975 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 JAMLQ86YT9 394 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 NIM1KQ8IY84 436 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 RBBP8NLQ8NC74 664 aaPredicted RBP5.72□□□□□ -1.49
VAPA-203ENST00000577539 ZNF473Q8WTR7 871 aaKnown RBP5.72□□□□□ -1.49
VAPA-203ENST00000577539 C18orf8Q96DM3 657 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 EPN3Q9H201 632 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 CARD9Q9H257 536 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 DMAC2Q9NW81 257 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 KCND2Q9NZV8 630 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 MTRF1LQ9UGC7 380 aaKnown RBP5.72□□□□□ -1.49
VAPA-203ENST00000577539 MTUS1Q9ULD2 1270 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 STXBP5LQ9Y2K9 1186 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 TAF1LQ8IZX4 1826 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 GOLGA6L7A0A1B0GV03 622 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 DENND3A2RUS2 1198 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 HNRNPDLO14979 420 aaKnown RBP5.72□□□□□ -1.49
VAPA-203ENST00000577539 HARSP12081 509 aaKnown RBP5.72□□□□□ -1.49
VAPA-203ENST00000577539 LMNB2Q03252 620 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 C2CD6Q53TS8 623 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 FBXW10Q5XX13 1052 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 TMC3Q7Z5M5 1100 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 SLC47A2Q86VL8 602 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 CPNE8Q86YQ8 564 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 TTLL6Q8N841 843 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 MDM1Q8TC05 714 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 FBXO25Q8TCJ0 367 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 NEK9Q8TD19 979 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 CEP170P1Q96L14 293 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 NT5C1BQ96P26 610 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 APBA2Q99767 749 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 ERP44Q9BS26 406 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 PI4K2AQ9BTU6 479 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 NUP85Q9BW27 656 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 TMEM117Q9H0C3 514 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 ZNF576Q9H609 170 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 NEUROD4Q9HD90 331 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 KMT5AQ9NQR1 393 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 DNAJC17Q9NVM6 304 aaKnown RBP5.72□□□□□ -1.49
VAPA-203ENST00000577539 PRKAG3Q9UGI9 489 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 EXOC7Q9UPT5 735 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 PCDHB5Q9Y5E4 795 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 COMMD10Q9Y6G5 202 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 UBE4BO95155 1302 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 ATRNL1Q5VV63 1379 aa5.72□□□□□ -1.49
VAPA-203ENST00000577539 DCDC2CA8MYV0 355 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 DDX3YO15523 660 aaKnown RBP5.71□□□□□ -1.49
VAPA-203ENST00000577539 DNAJC6O75061 913 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 ATP9AO75110 1047 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 S100BP04271 92 aaPredicted RBP5.71□□□□□ -1.49
VAPA-203ENST00000577539 ICAM1P05362 532 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 ADRB2P07550 413 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 MMEP08473 750 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 PDE6CP51160 858 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 MFAP3P55082 362 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 PPP2R2AP63151 447 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 PPATQ06203 517 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 DMP1Q13316 513 aaPredicted RBP5.71□□□□□ -1.49
VAPA-203ENST00000577539 BIRC3Q13489 604 aa5.71□□□□□ -1.49
VAPA-203ENST00000577539 TRIP13Q15645 432 aaPredicted RBP5.71□□□□□ -1.49
VAPA-203ENST00000577539 SNRNP35Q16560 246 aaKnown RBP5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms