RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 OR7A10O76100 309 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 C10orf120Q5SQS8 335 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 SLC30A9Q6PML9 568 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 IPMKQ8NFU5 416 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 MED8Q96G25 268 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 SEC16BQ96JE7 1060 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 KATNAL1Q9BW62 490 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 DKK3Q9UBP4 350 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 SCAF8Q9UPN6 1271 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 PRKAB1Q9Y478 270 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 MYO18AQ92614 2054 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 FAM25EA8MYX2 175 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 SP100P23497 879 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 PTPN7P35236 360 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 SGSM1Q2NKQ1 1148 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 TCEAL5Q5H9L2 206 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 KDM5BQ9UGL1 1544 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 ARSEP51690 589 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 EIF3EP60228 445 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 APBA1Q02410 837 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 MAPK11Q15759 364 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 ERAP1Q9NZ08 941 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 BFARQ9NZS9 450 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 RALGAPBQ86X10 1494 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 CYP2B6P20813 491 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 C4BPBP20851 252 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 CCR4P51679 360 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 ABCE1P61221 599 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 ARSJQ5FYB0 599 aaPredicted RBP16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 DNAJC1Q96KC8 554 aaKnown RBP16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 SH2D3AQ9BRG2 576 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 CPVLQ9H3G5 476 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 ETNK1Q9HBU6 452 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 IL1RAPL1Q9NZN1 696 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 CDC23Q9UJX2 597 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 TMCC3Q9ULS5 477 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 SPEF1Q9Y4P9 236 aa16.56■□□□□ 0.24
CACNA1A-202ENST00000573710 CAMK2GQ13555 558 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 CDH18Q13634 790 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 HPS6Q86YV9 775 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 CACTIN-AS1Q8N1I8 211 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 THUMPD3Q9BV44 507 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 ABI2Q9NYB9 513 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 CTNNAL1Q9UBT7 734 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 EFR3BQ9Y2G0 817 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 CALB1P05937 261 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 LBPP18428 481 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 HARS2P49590 506 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 KIF23Q02241 960 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 CNTN1Q12860 1018 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 NCAPHQ15003 741 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 AMHR2Q16671 573 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 RGL4Q8IZJ4 473 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 NEK7Q8TDX7 302 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 TSPOAP1O95153 1857 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 UMPSP11172 480 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 USP10Q14694 798 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 MMGT1Q8N4V1 131 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 ZNF564Q8TBZ8 553 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 THOC2Q8NI27 1593 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 CPSF4O95639 269 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 DNAJB2P25686 324 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 HIST2H2ACQ16777 129 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 HIST2H2AA3Q6FI13 130 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 WDR60Q8WVS4 1066 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 CHAMP1Q96JM3 812 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 CLEC4MQ9H2X3 399 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 RBAKQ9NYW8 714 aaPredicted RBP16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 TRIM64A6NGJ6 449 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 TRAPPC3O43617 180 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 FGFR4P22455 802 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 SRP54P61011 504 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 VAC14Q08AM6 782 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 KLHL38Q2WGJ6 581 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 B3GALNT2Q8NCR0 500 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 SRP68Q9UHB9 627 aaKnown RBP16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 VAV3Q9UKW4 847 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 ZBTB40Q9NUA8 1239 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 FAM49BQ9NUQ9 324 aa16.55■□□□□ 0.24
CACNA1A-202ENST00000573710 UHRF1BP1LA0JNW5 1464 aa16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 CLASP2O75122 1294 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 CMA1P23946 247 aa16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 SPP2Q13103 211 aa16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 TRIM16LQ309B1 348 aa16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 ZNF772Q68DY9 489 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 PIGKQ92643 395 aa16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 TDRKHQ9Y2W6 561 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 KCNQ3O43525 872 aa16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 STIP1P31948 543 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 BTN3A2P78410 334 aa16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 S100A9P06702 114 aaKnown RBP16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 LONP2Q86WA8 852 aa16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 FAM45AQ8TCE6 357 aa16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 SLC9A6Q92581 669 aa16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 ATN1P54259 1190 aaPredicted RBP16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 AP1S2P56377 157 aa16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 TSPAN14Q8NG11 270 aa16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 CAAP1Q9H8G2 361 aa16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 SLAIN2Q9P270 581 aa16.54■□□□□ 0.24
CACNA1A-202ENST00000573710 TCP11X1B4DZS4 312 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms