RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 OR1D2P34982 312 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 LIG4P49917 911 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 CLCN5P51795 746 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 PTPN5P54829 565 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 OSTNP61366 133 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 FAM193AP78312 1265 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 PPP2R3AQ06190 1150 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 EHHADHQ08426 723 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 ALCAMQ13740 583 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 PRSS36Q5K4E3 855 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 AXDND1Q5T1B0 1012 aaPredicted RBP7.47□□□□□ -1.21
SPG11-224ENST00000561268 LIN9Q5TKA1 542 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 SPATA1Q5VX52 437 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 TPGS2Q68CL5 300 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 ZNF280DQ6N043 979 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 CRELD2Q6UXH1 353 aaPredicted RBP7.47□□□□□ -1.21
SPG11-224ENST00000561268 ZBTB33Q86T24 672 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 SFR1Q86XK3 245 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 PALB2Q86YC2 1186 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 GLYCTKQ8IVS8 523 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 CD302Q8IX05 232 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 NPAS3Q8IXF0 933 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 TCEAL8Q8IYN2 117 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 PDCL2Q8N4E4 241 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 TMEM105Q8N8V8 129 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 LINC00301Q8NCQ3 95 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 ZNF461Q8TAF7 563 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 SLC7A14Q8TBB6 771 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 SPATA32Q96LK8 384 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 OXCT2Q9BYC2 517 aaPredicted RBP7.47□□□□□ -1.21
SPG11-224ENST00000561268 NAT10Q9H0A0 1025 aaKnown RBP7.47□□□□□ -1.21
SPG11-224ENST00000561268 TNMDQ9H2S6 317 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 IMPACTQ9P2X3 320 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 LIMD1Q9UGP4 676 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 FBXL5Q9UKA1 691 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 CDH7Q9ULB5 785 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 KCNH3Q9ULD8 1083 aa7.47□□□□□ -1.21
SPG11-224ENST00000561268 MYO15AQ9UKN7 3530 aa7.46□□□□□ -1.21
SPG11-224ENST00000561268 GVINP1Q7Z2Y8 2422 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 TISP43B9A030 160 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 ANKRD63C9JTQ0 380 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 PROB1E7EW31 1015 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 H7C4K7 107 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 PIRO00625 290 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 CTIFO43310 598 aaKnown RBP7.46□□□□□ -1.22
SPG11-224ENST00000561268 XPOTO43592 962 aaKnown RBP7.46□□□□□ -1.22
SPG11-224ENST00000561268 XYLBO75191 536 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 TBCAO75347 108 aaKnown RBP7.46□□□□□ -1.22
SPG11-224ENST00000561268 MICAL2O94851 1124 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 CYP11A1P05108 521 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 NFICP08651 508 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 SPATA31D3P0C874 917 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 GAP43P17677 238 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 AOC1P19801 751 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 MARCKSP29966 332 aaPredicted RBP7.46□□□□□ -1.22
SPG11-224ENST00000561268 NMT1P30419 496 aaKnown RBP7.46□□□□□ -1.22
SPG11-224ENST00000561268 ADSSP30520 456 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 GSDMDP57764 484 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 TYRO3Q06418 890 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 ZRSR1Q15695 479 aaKnown RBP7.46□□□□□ -1.22
SPG11-224ENST00000561268 SLC5A9Q2M3M2 681 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 SEZ6Q53EL9 994 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 PPM1LQ5SGD2 360 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 SPATA31D4Q6ZUB0 917 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 GET4Q7L5D6 327 aaPredicted RBP7.46□□□□□ -1.22
SPG11-224ENST00000561268 ZNF720Q7Z2F6 126 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 CEP57Q86XR8 500 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 NT5DC4Q86YG4 428 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 EFCAB13Q8IY85 973 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 TMEM130Q8N3G9 435 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 KRI1Q8N9T8 703 aaKnown RBP7.46□□□□□ -1.22
SPG11-224ENST00000561268 CXorf38Q8TB03 319 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 DDX12PQ92771 950 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 FGF13Q92913 245 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 CLIC6Q96NY7 704 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 DDX23Q9BUQ8 820 aaKnown RBP7.46□□□□□ -1.22
SPG11-224ENST00000561268 IRX2Q9BZI1 471 aaPredicted RBP7.46□□□□□ -1.22
SPG11-224ENST00000561268 ASB7Q9H672 318 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 KBTBD4Q9NVX7 518 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 DNMT3BQ9UBC3 853 aaKnown RBP7.46□□□□□ -1.22
SPG11-224ENST00000561268 HSFX1Q9UBD0 423 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 WNT16Q9UBV4 365 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 AFF4Q9UHB7 1163 aaKnown RBP7.46□□□□□ -1.22
SPG11-224ENST00000561268 R3HCC1Q9Y3T6 440 aaKnown RBP7.46□□□□□ -1.22
SPG11-224ENST00000561268 INSL5Q9Y5Q6 135 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 RIF1Q5UIP0 2472 aaKnown RBP7.46□□□□□ -1.22
SPG11-224ENST00000561268 USP34Q70CQ2 3546 aa7.46□□□□□ -1.22
SPG11-224ENST00000561268 VPS13AQ96RL7 3174 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 FAM237AA0A1B0GTK4 181 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 KRBA1A5PL33 1030 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 LACTBL1A8MY62 500 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 NRG2O14511 850 aaPredicted RBP7.45□□□□□ -1.22
SPG11-224ENST00000561268 PPEF2O14830 753 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 NARSO43776 548 aaKnown RBP7.45□□□□□ -1.22
SPG11-224ENST00000561268 SEC24AO95486 1093 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 HARSP12081 509 aaKnown RBP7.45□□□□□ -1.22
SPG11-224ENST00000561268 FSHRP23945 695 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 FCARP24071 287 aa7.45□□□□□ -1.22
SPG11-224ENST00000561268 GBP2P32456 591 aaPredicted RBP7.45□□□□□ -1.22
SPG11-224ENST00000561268 TXLNAP40222 546 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 618.5 ms