RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 CHAMP1Q96JM3 812 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 SENP8Q96LD8 212 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 CBWD1Q9BRT8 395 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 SORCS3Q9UPU3 1222 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 CLUHO75153 1309 aa10.53□□□□□ -0.72
TNFRSF1A-214ENST00000543048 ZNF638Q14966 1978 aaKnown RBP10.52□□□□□ -0.72
TNFRSF1A-214ENST00000543048 FAM237AA0A1B0GTK4 181 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 WDR27A2RRH5 827 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 ZNF233A6NK53 670 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 OR6C75A6NL08 312 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 PRRG1O14668 218 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 PPEF2O14830 753 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 ACTN4O43707 911 aaKnown RBP10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 ATF2P15336 505 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 PFKFB1P16118 471 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 TYMPP19971 482 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 FSHRP23945 695 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 SYKP43405 635 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 NUCB2P80303 420 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 YWHAHQ04917 246 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 PSMD2Q13200 908 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 SURF1Q15526 300 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 ARMCX5Q6P1M9 558 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 BMP8AQ7Z5Y6 402 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 GRASPQ7Z6J2 395 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 BRSK2Q8IWQ3 736 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 EFCAB13Q8IY85 973 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 TCEAL8Q8IYN2 117 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 GRAMD1CQ8IYS0 662 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 GPD1LQ8N335 351 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 NOC3LQ8WTT2 800 aaKnown RBP10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 NXPE3Q969Y0 559 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 MFSD14AQ96MC6 490 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 CYP4F11Q9HBI6 524 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 KIAA1586Q9HCI6 787 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 SLC39A2Q9NP94 309 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 RBAKQ9NYW8 714 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 IGSF9Q9P2J2 1179 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 EPS15L1Q9UBC2 864 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 AFF4Q9UHB7 1163 aaKnown RBP10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 POLIQ9UNA4 740 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 HPSEQ9Y251 543 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 TIMM13Q9Y5L4 95 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 ZFP37Q9Y6Q3 630 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 UBE4BO95155 1302 aa10.52□□□□□ -0.73
TNFRSF1A-214ENST00000543048 DENND4CQ5VZ89 1909 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 A0A1W2PQ27 194 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 A0A1W2PQ64 194 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 A0A1W2PQD8 194 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 CYB561D2O14569 222 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 SPTLC1O15269 473 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 TGFB1I1O43294 461 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 KLRC4O43908 158 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 N4BP1O75113 896 aaKnown RBP10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 SEC24AO95486 1093 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 LRG1P02750 347 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 CYP11A1P05108 521 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 MYL1P05976 194 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 ASGR2P07307 311 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 ODC1P11926 461 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 LAMP2P13473 410 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 PTPN2P17706 415 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 TAF6P49848 677 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 TFAMQ00059 246 aaKnown RBP10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 ADCY1Q08828 1119 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 TDGQ13569 410 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 MTMR3Q13615 1198 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 MYBPC2Q14324 1141 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 OVOS1Q6IE37 1185 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 METTL23Q86XA0 190 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 SCFD1Q8WVM8 642 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 PBXIP1Q96AQ6 731 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 BORCS6Q96GS4 357 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 MYADMQ96S97 322 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 KCNK12Q9HB15 430 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 HSPBP1Q9NZL4 362 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 CGNQ9P2M7 1197 aaKnown RBP10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 DNMT3BQ9UBC3 853 aaKnown RBP10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 DSEQ9UL01 958 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 AGAP1Q9UPQ3 857 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 ZNF318Q5VUA4 2279 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 ZDBF2Q9HCK1 2354 aa10.51□□□□□ -0.73
TNFRSF1A-214ENST00000543048 KPNA7A9QM74 516 aa10.5□□□□□ -0.73
TNFRSF1A-214ENST00000543048 CLIC2O15247 247 aa10.5□□□□□ -0.73
TNFRSF1A-214ENST00000543048 CPB1P15086 417 aa10.5□□□□□ -0.73
TNFRSF1A-214ENST00000543048 PNPLA4P41247 253 aa10.5□□□□□ -0.73
TNFRSF1A-214ENST00000543048 NDUFA8P51970 172 aa10.5□□□□□ -0.73
TNFRSF1A-214ENST00000543048 WNT7BP56706 349 aa10.5□□□□□ -0.73
TNFRSF1A-214ENST00000543048 NTHL1P78549 312 aa10.5□□□□□ -0.73
TNFRSF1A-214ENST00000543048 RBP5P82980 135 aa10.5□□□□□ -0.73
TNFRSF1A-214ENST00000543048 GPR17Q13304 367 aa10.5□□□□□ -0.73
TNFRSF1A-214ENST00000543048 KNOP1Q1ED39 458 aaKnown RBP10.5□□□□□ -0.73
TNFRSF1A-214ENST00000543048 DUOXA2Q1HG44 320 aa10.5□□□□□ -0.73
TNFRSF1A-214ENST00000543048 BMT2Q1RMZ1 405 aa10.5□□□□□ -0.73
TNFRSF1A-214ENST00000543048 SV2CQ496J9 727 aa10.5□□□□□ -0.73
TNFRSF1A-214ENST00000543048 RNF19BQ6ZMZ0 732 aa10.5□□□□□ -0.73
TNFRSF1A-214ENST00000543048 HFE2Q6ZVN8 426 aa10.5□□□□□ -0.73
TNFRSF1A-214ENST00000543048 HS2ST1Q7LGA3 356 aa10.5□□□□□ -0.73
TNFRSF1A-214ENST00000543048 NELFCDQ8IXH7 590 aa10.5□□□□□ -0.73
TNFRSF1A-214ENST00000543048 THEM5Q8N1Q8 247 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms