RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 PPM1HQ9ULR3 514 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 DIS3Q9Y2L1 958 aaKnown RBP8.05□□□□□ -1.12
NEDD9-208ENST00000504387 STARD13Q9Y3M8 1113 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 ABCA3Q99758 1704 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 LOC100653049A0A140TA62 436 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 MAGEA13PA6NCF6 341 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 ZMPSTE24O75844 475 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 KRT34O76011 436 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 CYP3A4P08684 503 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 RPA1P27694 616 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 VAMP7P51809 220 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 RHBDL3P58872 404 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 TAS2R40P59535 323 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 ZNF394Q53GI3 561 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 PPP6R3Q5H9R7 873 aaPredicted RBP8.04□□□□□ -1.12
NEDD9-208ENST00000504387 ARHGAP27Q6ZUM4 889 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 RAPH1Q70E73 1250 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 ZBTB46Q86UZ6 589 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 RASSF3Q86WH2 238 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 CBWD2Q8IUF1 395 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 GSTCDQ8NEC7 633 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 NSL1Q96IY1 281 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 MPP4Q96JB8 637 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 KREMEN1Q96MU8 473 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 TSSK1BQ9BXA7 367 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 HEMK1Q9Y5R4 338 aaPredicted RBP8.04□□□□□ -1.12
NEDD9-208ENST00000504387 SPDYE16A6NNV3 312 aaPredicted RBP8.04□□□□□ -1.12
NEDD9-208ENST00000504387 TRPA1O75762 1119 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 ATP2B4P23634 1241 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 GCAP28676 217 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 SERPINB6P35237 376 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 MXI1P50539 228 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 ARL4CP56559 192 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 FMO1Q01740 532 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 CETN1Q12798 172 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 MKRN3Q13064 507 aaKnown RBP8.04□□□□□ -1.12
NEDD9-208ENST00000504387 LBRQ14739 615 aaKnown RBP8.04□□□□□ -1.12
NEDD9-208ENST00000504387 SMTNL2Q2TAL5 461 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 WASHC2DQ5SRD0 308 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 C3orf62Q6ZUJ4 267 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 RHPN2Q8IUC4 686 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 ATL2Q8NHH9 583 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 GRAMD1AQ96CP6 724 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 HIC2Q96JB3 615 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 ACAP3Q96P50 834 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 TMEM109Q9BVC6 243 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 TRIM55Q9BYV6 548 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 TDRD3Q9H7E2 651 aaKnown RBP8.04□□□□□ -1.12
NEDD9-208ENST00000504387 WHRNQ9P202 907 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 ANKFY1Q9P2R3 1169 aa8.04□□□□□ -1.12
NEDD9-208ENST00000504387 TDRKHQ9Y2W6 561 aaKnown RBP8.04□□□□□ -1.12
NEDD9-208ENST00000504387 NUP98P52948 1817 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 NHSL1Q5SYE7 1610 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 E5RJQ4 531 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 FCHO1O14526 889 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 CYB561D2O14569 222 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 SLC16A4O15374 487 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 ATP5HO75947 161 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 TOP3BO95985 862 aaKnown RBP8.03□□□□□ -1.12
NEDD9-208ENST00000504387 GH2P01242 217 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 HARSP12081 509 aaKnown RBP8.03□□□□□ -1.12
NEDD9-208ENST00000504387 ALAS1P13196 640 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 HSPA6P17066 643 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 NELFEP18615 380 aaKnown RBP8.03□□□□□ -1.12
NEDD9-208ENST00000504387 TPP2P29144 1249 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-208ENST00000504387 CCNG1P51959 295 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 SLC25A3Q00325 362 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 ZRSR2Q15696 482 aaKnown RBP8.03□□□□□ -1.12
NEDD9-208ENST00000504387 PDK4Q16654 411 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 GRAMD1BQ3KR37 738 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 SPOPLQ6IQ16 392 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 C11orf63Q6NUN7 778 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 RHBDF2Q6PJF5 856 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 RIPOR1Q6ZS17 1223 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 ARID3BQ8IVW6 561 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-208ENST00000504387 AGR3Q8TD06 166 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 PLEKHO2Q8TD55 490 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 TEKT1Q969V4 418 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 OPTNQ96CV9 577 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 PPP1R36Q96LQ0 422 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 MANSC1Q9H8J5 431 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 ZNF711Q9Y462 761 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 CACNA1SQ13698 1873 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 ZMYM2Q9UBW7 1377 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 ADAMTS7Q9UKP4 1686 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 EP400Q96L91 3159 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 PARP4Q9UKK3 1724 aaKnown RBP8.03□□□□□ -1.12
NEDD9-208ENST00000504387 F5H6K3 240 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 GAS7O60861 476 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 CYP11B1P15538 503 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 FUT4P22083 530 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 MAGEA10P43363 369 aaPredicted RBP8.03□□□□□ -1.12
NEDD9-208ENST00000504387 UBAP2LQ14157 1087 aaKnown RBP8.03□□□□□ -1.12
NEDD9-208ENST00000504387 STAT4Q14765 748 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 RASA2Q15283 850 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 SPDYCQ5MJ68 293 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 SLC10A5Q5PT55 438 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 CDC42EP5Q6NZY7 148 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 ZNF720Q7Z2F6 126 aa8.03□□□□□ -1.12
NEDD9-208ENST00000504387 CCDC33Q8N5R6 958 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms