RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 TTC7AQ9ULT0 858 aaPredicted RBP13.78□□□□□ -0.2
CCNL1-216ENST00000475298 TMEM120BA0PK00 339 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 P4HA2O15460 535 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 ZBED4O75132 1171 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 SPATA31D3P0C874 917 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 JAK3P52333 1124 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 PLTPP55058 493 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 PTENP60484 403 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 GPC5P78333 572 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 ACVR2BQ13705 512 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 LLGL1Q15334 1064 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 SPATA31D4Q6ZUB0 917 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 TRIM42Q8IWZ5 723 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 RHOT2Q8IXI1 618 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 FAM71AQ8IYT1 594 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 ZDHHC14Q8IZN3 488 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 TAS1R2Q8TE23 839 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 PI4K2AQ9BTU6 479 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 ST6GALNAC4Q9H4F1 302 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 KLHL14Q9P2G3 628 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 HAO1Q9UJM8 370 aa13.77□□□□□ -0.21
CCNL1-216ENST00000475298 ZNFX1Q9P2E3 1918 aaKnown RBP13.77□□□□□ -0.21
CCNL1-216ENST00000475298 GH1P01241 217 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 DLATP10515 647 aaKnown RBP13.76□□□□□ -0.21
CCNL1-216ENST00000475298 COMTP21964 271 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 TARSP26639 723 aaKnown RBP13.76□□□□□ -0.21
CCNL1-216ENST00000475298 EPHB2P29323 1055 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 VHLP40337 213 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 DR1Q01658 176 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 FMO1Q01740 532 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 DMP1Q13316 513 aaPredicted RBP13.76□□□□□ -0.21
CCNL1-216ENST00000475298 MFSD5Q6N075 450 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 TAOK1Q7L7X3 1001 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 C18orf8Q96DM3 657 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 CEP170P1Q96L14 293 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 KMT5AQ9NQR1 393 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 KIAA1217Q5T5P2 1943 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 COL11A1P12107 1806 aaPredicted RBP13.76□□□□□ -0.21
CCNL1-216ENST00000475298 WDR81Q562E7 1941 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 RASGRF2O14827 1237 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 NR3C2P08235 984 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 T-ENOLP0DO92 83 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 KRT76Q01546 638 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 OCRLQ01968 901 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 MPP2Q14168 576 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 DBN1Q16643 649 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 MAP4K3Q8IVH8 894 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 HELQQ8TDG4 1101 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 TMEM174Q8WUU8 243 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 JDP2Q8WYK2 163 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 INPP5DQ92835 1189 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 DCLRE1BQ9H816 532 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 GRHL1Q9NZI5 618 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 HACL1Q9UJ83 578 aa13.76□□□□□ -0.21
CCNL1-216ENST00000475298 TCRBV7S2A1N4TA0A589 114 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 KIAA0391O15091 583 aaKnown RBP13.75□□□□□ -0.21
CCNL1-216ENST00000475298 RGS20O76081 388 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 SFNP31947 248 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 BPIFB4P59827 614 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 SFSWAPQ12872 951 aaKnown RBP13.75□□□□□ -0.21
CCNL1-216ENST00000475298 LMBRD2Q68DH5 695 aaPredicted RBP13.75□□□□□ -0.21
CCNL1-216ENST00000475298 SNRNP48Q6IEG0 339 aaKnown RBP13.75□□□□□ -0.21
CCNL1-216ENST00000475298 SWSAP1Q6NVH7 229 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 OTUD6AQ7L8S5 288 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 NLRX1Q86UT6 975 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 SCG3Q8WXD2 468 aaKnown RBP13.75□□□□□ -0.21
CCNL1-216ENST00000475298 POMGNT1Q8WZA1 660 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 SHC3Q92529 594 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 HAPLN3Q96S86 360 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 ZSWIM1Q9BR11 485 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 SPATA16Q9BXB7 569 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 STMN4Q9H169 189 aaPredicted RBP13.75□□□□□ -0.21
CCNL1-216ENST00000475298 ANKEF1Q9NU02 776 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 SNX24Q9Y343 169 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 DAAM1Q9Y4D1 1078 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 PCDHA10Q9Y5I2 948 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 SLC4A7Q9Y6M7 1214 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 MAGEA13PA6NCF6 341 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 RIPK2O43353 540 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 CYP11B1P15538 503 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 FGFR4P22455 802 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 LSAMPQ13449 338 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 MTFR1Q15390 333 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 KHDC1Q4VXA5 237 aaKnown RBP13.75□□□□□ -0.21
CCNL1-216ENST00000475298 SNX30Q5VWJ9 437 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 KRT39Q6A163 491 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 C11orf63Q6NUN7 778 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 VSIG10LQ86VR7 867 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 MICALL2Q8IY33 904 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 GDAP1Q8TB36 358 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 MIPOL1Q8TD10 442 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 LRRC8CQ8TDW0 803 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 GBP5Q96PP8 586 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 NUP85Q9BW27 656 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 TAOK3Q9H2K8 898 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 CHKBQ9Y259 395 aa13.75□□□□□ -0.21
CCNL1-216ENST00000475298 FOXO6A8MYZ6 492 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 MAPK13O15264 365 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 ATP5HO75947 161 aa13.74□□□□□ -0.21
CCNL1-216ENST00000475298 PYGMP11217 842 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms