RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 ENO1P06733 434 aaKnown RBP8.39□□□□□ -1.07
TPM3-215ENST00000469717 CD58P19256 250 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 PGM1P36871 562 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 KDSRQ06136 332 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 CDC16Q13042 620 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 PTK6Q13882 451 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 ATP13A4Q4VNC1 1196 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 KAZNQ674X7 775 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 PAOXQ6QHF9 649 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 TREML1Q86YW5 311 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 PPM1KQ8N3J5 372 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 ACSF2Q96CM8 615 aaPredicted RBP8.39□□□□□ -1.07
TPM3-215ENST00000469717 FNBP1Q96RU3 617 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 ITGB4P16144 1822 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 ROBO3Q96MS0 1386 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 FAM237BA0A1B0GVD1 139 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 TYROBPO43914 113 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 ESRRAP11474 423 aaPredicted RBP8.39□□□□□ -1.07
TPM3-215ENST00000469717 KRT10P13645 584 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 FUT4P22083 530 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 DYNC1I2Q13409 638 aaKnown RBP8.39□□□□□ -1.07
TPM3-215ENST00000469717 ORC2Q13416 577 aaPredicted RBP8.39□□□□□ -1.07
TPM3-215ENST00000469717 LPCAT4Q643R3 524 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 GSTA5Q7RTV2 222 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 ZBED8Q8IZ13 594 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 SDR16C5Q8N3Y7 309 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 EFCAB3Q8N7B9 438 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 C12orf50Q8NA57 414 aaPredicted RBP8.39□□□□□ -1.07
TPM3-215ENST00000469717 TCP10LQ8TDR4 215 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 AGBL1Q96MI9 1066 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 PLEKHG4BQ96PX9 1271 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 PANX3Q96QZ0 392 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 TMEM120AQ9BXJ8 343 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 ANO3Q9BYT9 981 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 KCNK13Q9HB14 408 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 AGPAT3Q9NRZ7 376 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 DDX18Q9NVP1 670 aaKnown RBP8.39□□□□□ -1.07
TPM3-215ENST00000469717 PCDHGB4Q9UN71 923 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 PCDHGB5Q9Y5G0 923 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 GOLGA8IPA6NC78 632 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 GOLGA8JA6NMD2 632 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 SPDYE16A6NNV3 312 aaPredicted RBP8.39□□□□□ -1.07
TPM3-215ENST00000469717 SLC16A3O15427 465 aaKnown RBP8.39□□□□□ -1.07
TPM3-215ENST00000469717 ANPEPP15144 967 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 ALDH1B1P30837 517 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 SSTR1P30872 391 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 HOXA13P31271 388 aaPredicted RBP8.39□□□□□ -1.07
TPM3-215ENST00000469717 FMO1Q01740 532 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 STAT4Q14765 748 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 SYCP2LQ5T4T6 812 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 RINT1Q6NUQ1 792 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 RIPOR1Q6ZS17 1223 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 C16orf86Q6ZW13 317 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 ZNF365Q70YC5 407 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 TPH2Q8IWU9 490 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 ZNF276Q8N554 614 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 HIPK4Q8NE63 616 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 FLAD1Q8NFF5 587 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 CFAP61Q8NHU2 1237 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 PLEKHO2Q8TD55 490 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 PYDC1Q8WXC3 89 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 KREMEN1Q96MU8 473 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 ATXN10Q9UBB4 475 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 DDX60LQ5H9U9 1706 aaKnown RBP8.39□□□□□ -1.07
TPM3-215ENST00000469717 ZNFX1Q9P2E3 1918 aaKnown RBP8.39□□□□□ -1.07
TPM3-215ENST00000469717 B2RBV5 119 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 TCEA3O75764 348 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 FAM13AO94988 1023 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 GGPS1O95749 300 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 LMNAP02545 664 aaKnown RBP8.38□□□□□ -1.07
TPM3-215ENST00000469717 FAM200BP0CF97 657 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 USH1GQ495M9 461 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 MFSD4BQ5TF39 518 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 RNF111Q6ZNA4 994 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 SPATA24Q86W54 205 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 ABTB1Q969K4 478 aaPredicted RBP8.38□□□□□ -1.07
TPM3-215ENST00000469717 NSL1Q96IY1 281 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 HIC2Q96JB3 615 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 MPP4Q96JB8 637 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 ECSITQ9BQ95 431 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 THTPAQ9BU02 230 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 PDP2Q9P2J9 529 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 MARCOQ9UEW3 520 aaPredicted RBP8.38□□□□□ -1.07
TPM3-215ENST00000469717 NOCTQ9UK39 431 aaKnown RBP8.38□□□□□ -1.07
TPM3-215ENST00000469717 RABGAP1Q9Y3P9 1069 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 ATP8B3O60423 1300 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 MYH14Q7Z406 1995 aaKnown RBP8.38□□□□□ -1.07
TPM3-215ENST00000469717 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.38□□□□□ -1.07
TPM3-215ENST00000469717 PNMA6FA0A0J9YX94 578 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 PPEF1O14829 653 aaPredicted RBP8.38□□□□□ -1.07
TPM3-215ENST00000469717 ZNF862O60290 1169 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 GAS8O95995 478 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 FDX1P10109 184 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 TCF4P15884 667 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 MAGEA8P43361 318 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 HIRAP54198 1017 aaPredicted RBP8.38□□□□□ -1.07
TPM3-215ENST00000469717 BFSP1Q12934 665 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 LSAMPQ13449 338 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 ALCAMQ13740 583 aa8.38□□□□□ -1.07
TPM3-215ENST00000469717 RBM15BQ8NDT2 890 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms