RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 FIGNQ5HY92 759 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 SLC17A8Q8NDX2 589 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 SLC16A10Q8TF71 515 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 KLRG1Q96E93 195 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 RPGRIP1Q96KN7 1286 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 BARX2Q9UMQ3 279 aaPredicted RBP13.05□□□□□ -0.32
USP11-206ENST00000469080 ASB3Q9Y575 518 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 LAMA3Q16787 3333 aa13.05□□□□□ -0.32
USP11-206ENST00000469080 TTLL13PA6NNM8 815 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 IGF2BP3O00425 579 aaKnown RBP eCLIP13.04□□□□□ -0.32
USP11-206ENST00000469080 VTNP04004 478 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 NSFP46459 744 aaKnown RBP13.04□□□□□ -0.32
USP11-206ENST00000469080 RAP1GAPP47736 663 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 RAD23BP54727 409 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 AMHR2Q16671 573 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 NOP9Q86U38 636 aaKnown RBP13.04□□□□□ -0.32
USP11-206ENST00000469080 C7orf31Q8N865 590 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 CASKIN2Q8WXE0 1202 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 DMAP1Q9NPF5 467 aaPredicted RBP13.04□□□□□ -0.32
USP11-206ENST00000469080 ATRNL1Q5VV63 1379 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 PIAS1O75925 651 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 VIMP08670 466 aaKnown RBP13.04□□□□□ -0.32
USP11-206ENST00000469080 ZNF286BP0CG31 522 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 NQO1P15559 274 aaKnown RBP13.04□□□□□ -0.32
USP11-206ENST00000469080 NCCRP1Q6ZVX7 275 aaPredicted RBP13.04□□□□□ -0.32
USP11-206ENST00000469080 ZBTB8BQ8NAP8 495 aaPredicted RBP13.04□□□□□ -0.32
USP11-206ENST00000469080 ZNF564Q8TBZ8 553 aaPredicted RBP13.04□□□□□ -0.32
USP11-206ENST00000469080 RMDN2Q96LZ7 410 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 CARD9Q9H257 536 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 C10orf88Q9H8K7 445 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 PCSK1NQ9UHG2 260 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 INTUQ9ULD6 942 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 ITM2BQ9Y287 266 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 UBIAD1Q9Y5Z9 338 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 STK24Q9Y6E0 443 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 CFAP73A6NFT4 308 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 ACSL3O95573 720 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 HLA-DRAP01903 254 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 GHRP10912 638 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 IREB2P48200 963 aaKnown RBP13.04□□□□□ -0.32
USP11-206ENST00000469080 CDH8P55286 799 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 GLRA4Q5JXX5 417 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 CYP4A22Q5TCH4 519 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 EXOC8Q8IYI6 725 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 SMC1BQ8NDV3 1235 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 ASAP3Q8TDY4 903 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 LRRN4Q8WUT4 740 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 P3H4Q92791 437 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 C18orf8Q96DM3 657 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 MTMR12Q9C0I1 747 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 SEL1LQ9UBV2 794 aa13.04□□□□□ -0.32
USP11-206ENST00000469080 ZNF214Q9UL59 606 aaPredicted RBP13.04□□□□□ -0.32
USP11-206ENST00000469080 TRIM43BA6NCK2 446 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 GOLGA8MH3BSY2 632 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 HSD17B4P51659 736 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 SMTNL2Q2TAL5 461 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 GLE1Q53GS7 698 aaKnown RBP13.03□□□□□ -0.32
USP11-206ENST00000469080 PRAMEF19Q5SWL8 479 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 SCYL2Q6P3W7 929 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 EMBQ6PCB8 327 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 USP37Q86T82 979 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 VTI1AQ96AJ9 217 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 HIC2Q96JB3 615 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 NRBP2Q9NSY0 501 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 ZNF180Q9UJW8 692 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 PLAAQ9Y263 795 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 ZMYM2Q9UBW7 1377 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 H0Y3Z8 333 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 LDHAP00338 332 aaKnown RBP13.03□□□□□ -0.32
USP11-206ENST00000469080 ADSSP30520 456 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 SLC44A4Q53GD3 710 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 CYP4F22Q6NT55 531 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 FAM47EQ6ZV65 393 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 GPD1LQ8N335 351 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 TMCO5AQ8N6Q1 288 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 UBL4BQ8N7F7 174 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 OR5B17Q8NGF7 314 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 NLRP7Q8WX94 980 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 CRYGNQ8WXF5 182 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 RAPGEF5Q92565 580 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 CPB2Q96IY4 423 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 AIPL1Q9NZN9 384 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 TMCO1Q9UM00 188 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 UMODL1Q5DID0 1318 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 B4GALT5O43286 388 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 CFHP08603 1231 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 MLH1P40692 756 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 TSNAXIP1Q2TAA8 658 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 ZNF568Q3ZCX4 644 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 PABPC1LQ4VXU2 614 aaKnown RBP13.03□□□□□ -0.32
USP11-206ENST00000469080 TMEM161BQ8NDZ6 487 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 PWWP2AQ96N64 755 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 SPATC1LQ9H0A9 340 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 ASCC2Q9H1I8 757 aaPredicted RBP13.03□□□□□ -0.32
USP11-206ENST00000469080 KCNK9Q9NPC2 374 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 SIX2Q9NPC8 291 aa13.03□□□□□ -0.32
USP11-206ENST00000469080 KAT6AQ92794 2004 aa13.02□□□□□ -0.32
USP11-206ENST00000469080 TCRBV7S2A1N4TA0A589 114 aa13.02□□□□□ -0.32
USP11-206ENST00000469080 HMGB1P1B2RPK0 211 aaPredicted RBP13.02□□□□□ -0.32
USP11-206ENST00000469080 TRAPPC3O43617 180 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms