RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 RPL13P26373 211 aaKnown RBP20.66■□□□□ 0.9
USP11-205ENST00000467378 LRPAP1P30533 357 aa20.66■□□□□ 0.9
USP11-205ENST00000467378 LRRC63Q05C16 580 aa20.66■□□□□ 0.9
USP11-205ENST00000467378 TMEM132DQ14C87 1099 aa20.66■□□□□ 0.9
USP11-205ENST00000467378 PSMD6Q15008 389 aa20.66■□□□□ 0.9
USP11-205ENST00000467378 SURF1Q15526 300 aa20.66■□□□□ 0.9
USP11-205ENST00000467378 KLHL40Q2TBA0 621 aa20.66■□□□□ 0.9
USP11-205ENST00000467378 DCLRE1AQ6PJP8 1040 aa20.66■□□□□ 0.9
USP11-205ENST00000467378 CD300LGQ6UXG3 332 aa20.66■□□□□ 0.9
USP11-205ENST00000467378 ZC3H3Q8IXZ2 948 aaKnown RBP20.66■□□□□ 0.9
USP11-205ENST00000467378 MLKLQ8NB16 471 aa20.66■□□□□ 0.9
USP11-205ENST00000467378 NELFBQ8WX92 580 aa20.66■□□□□ 0.9
USP11-205ENST00000467378 DDX27Q96GQ7 796 aaKnown RBP20.66■□□□□ 0.9
USP11-205ENST00000467378 TMEM169Q96HH4 297 aa20.66■□□□□ 0.9
USP11-205ENST00000467378 TSG101Q99816 390 aa20.66■□□□□ 0.9
USP11-205ENST00000467378 GZF1Q9H116 711 aaPredicted RBP20.66■□□□□ 0.9
USP11-205ENST00000467378 KCNK12Q9HB15 430 aa20.66■□□□□ 0.9
USP11-205ENST00000467378 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.66■□□□□ 0.9
USP11-205ENST00000467378 OTOGLQ3ZCN5 2332 aa20.66■□□□□ 0.9
USP11-205ENST00000467378 DNAH14Q0VDD8 3507 aa20.66■□□□□ 0.9
USP11-205ENST00000467378 SCN1AP35498 2009 aa20.65■□□□□ 0.9
USP11-205ENST00000467378 MAPK13O15264 365 aa20.65■□□□□ 0.9
USP11-205ENST00000467378 CFHP08603 1231 aa20.65■□□□□ 0.9
USP11-205ENST00000467378 RPL9P32969 192 aaKnown RBP20.65■□□□□ 0.9
USP11-205ENST00000467378 GUCY2FP51841 1108 aa20.65■□□□□ 0.9
USP11-205ENST00000467378 CEP135Q66GS9 1140 aa20.65■□□□□ 0.9
USP11-205ENST00000467378 KLHL10Q6JEL2 608 aa20.65■□□□□ 0.9
USP11-205ENST00000467378 FOXR2Q6PJQ5 311 aa20.65■□□□□ 0.9
USP11-205ENST00000467378 ZC3H14Q6PJT7 736 aaKnown RBP20.65■□□□□ 0.9
USP11-205ENST00000467378 DDX53Q86TM3 631 aaKnown RBP20.65■□□□□ 0.9
USP11-205ENST00000467378 VPS52Q8N1B4 723 aa20.65■□□□□ 0.9
USP11-205ENST00000467378 DCLK2Q8N568 766 aa20.65■□□□□ 0.9
USP11-205ENST00000467378 BEST2Q8NFU1 509 aa20.65■□□□□ 0.9
USP11-205ENST00000467378 FEZF2Q8TBJ5 459 aa20.65■□□□□ 0.9
USP11-205ENST00000467378 PLEKHO2Q8TD55 490 aa20.65■□□□□ 0.9
USP11-205ENST00000467378 RUBCNQ92622 972 aa20.65■□□□□ 0.9
USP11-205ENST00000467378 DUSP9Q99956 384 aaKnown RBP20.65■□□□□ 0.9
USP11-205ENST00000467378 VN1R3Q9BXE9 311 aa20.65■□□□□ 0.9
USP11-205ENST00000467378 DLL3Q9NYJ7 618 aa20.65■□□□□ 0.9
USP11-205ENST00000467378 CTNND2Q9UQB3 1225 aa20.65■□□□□ 0.9
USP11-205ENST00000467378 VWA8A3KMH1 1905 aa20.65■□□□□ 0.9
USP11-205ENST00000467378 TMEM189-UBE2V1I3L0A0 370 aa20.64■□□□□ 0.89
USP11-205ENST00000467378 PODXLO00592 558 aa20.64■□□□□ 0.89
USP11-205ENST00000467378 CETN3O15182 167 aa20.64■□□□□ 0.89
USP11-205ENST00000467378 NARSO43776 548 aaKnown RBP20.64■□□□□ 0.89
USP11-205ENST00000467378 AKAP3O75969 853 aa20.64■□□□□ 0.89
USP11-205ENST00000467378 KIF4AO95239 1232 aa20.64■□□□□ 0.89
USP11-205ENST00000467378 FKBP3Q00688 224 aaKnown RBP20.64■□□□□ 0.89
USP11-205ENST00000467378 TTI2Q6NXR4 508 aa20.64■□□□□ 0.89
USP11-205ENST00000467378 CAVIN1Q6NZI2 390 aaKnown RBP20.64■□□□□ 0.89
USP11-205ENST00000467378 RNF168Q8IYW5 571 aaPredicted RBP20.64■□□□□ 0.89
USP11-205ENST00000467378 C3orf58Q8NDZ4 430 aa20.64■□□□□ 0.89
USP11-205ENST00000467378 ADAM28Q9UKQ2 775 aa20.64■□□□□ 0.89
USP11-205ENST00000467378 FRMD4BQ9Y2L6 1034 aa20.64■□□□□ 0.89
USP11-205ENST00000467378 PTPRJQ12913 1337 aa20.63■□□□□ 0.89
USP11-205ENST00000467378 BICDL2A1A5D9 508 aa20.63■□□□□ 0.89
USP11-205ENST00000467378 TADA2AO75478 443 aa20.63■□□□□ 0.89
USP11-205ENST00000467378 PSMC2P35998 433 aaKnown RBP20.63■□□□□ 0.89
USP11-205ENST00000467378 STX17P56962 302 aa20.63■□□□□ 0.89
USP11-205ENST00000467378 MCCD1P59942 119 aaPredicted RBP20.63■□□□□ 0.89
USP11-205ENST00000467378 PAK1Q13153 545 aa20.63■□□□□ 0.89
USP11-205ENST00000467378 RSPO4Q2I0M5 234 aaPredicted RBP20.63■□□□□ 0.89
USP11-205ENST00000467378 DPCR1Q3MIW9 517 aa20.63■□□□□ 0.89
USP11-205ENST00000467378 GPR149Q86SP6 731 aa20.63■□□□□ 0.89
USP11-205ENST00000467378 PARD3BQ8TEW8 1205 aa20.63■□□□□ 0.89
USP11-205ENST00000467378 SLC22A17Q8WUG5 538 aa20.63■□□□□ 0.89
USP11-205ENST00000467378 CACTINQ8WUQ7 758 aaKnown RBP20.63■□□□□ 0.89
USP11-205ENST00000467378 CCDC127Q96BQ5 260 aa20.63■□□□□ 0.89
USP11-205ENST00000467378 EEF2KMTQ96G04 330 aa20.63■□□□□ 0.89
USP11-205ENST00000467378 FAM84AQ96KN4 292 aa20.63■□□□□ 0.89
USP11-205ENST00000467378 MED15Q96RN5 788 aa20.63■□□□□ 0.89
USP11-205ENST00000467378 ZBP1Q9H171 429 aa20.63■□□□□ 0.89
USP11-205ENST00000467378 SFXN1Q9H9B4 322 aa20.63■□□□□ 0.89
USP11-205ENST00000467378 INTS13Q9NVM9 706 aa20.63■□□□□ 0.89
USP11-205ENST00000467378 DPP3Q9NY33 737 aa20.63■□□□□ 0.89
USP11-205ENST00000467378 ANO9A1A5B4 782 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 TULP1O00294 542 aaPredicted RBP20.62■□□□□ 0.89
USP11-205ENST00000467378 PIRO00625 290 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 B3GAT3O94766 335 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 CLDN10P78369 228 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 TFAMQ00059 246 aaKnown RBP20.62■□□□□ 0.89
USP11-205ENST00000467378 LMBRD2Q68DH5 695 aaPredicted RBP20.62■□□□□ 0.89
USP11-205ENST00000467378 FUT10Q6P4F1 479 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 TAS1R1Q7RTX1 841 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 WDR49Q8IV35 697 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 OR5B17Q8NGF7 314 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 HASPINQ8TF76 798 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 ZNF516Q92618 1163 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 BORCS6Q96GS4 357 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 FNBP1Q96RU3 617 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 CGRRF1Q99675 332 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 MKNK1Q9BUB5 465 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 GPR62Q9BZJ7 368 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 IGSF9Q9P2J2 1179 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 WNT16Q9UBV4 365 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 RWDD2AQ9UIY3 292 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 CA14Q9ULX7 337 aa20.62■□□□□ 0.89
USP11-205ENST00000467378 MIA3Q5JRA6 1907 aa20.61■□□□□ 0.89
USP11-205ENST00000467378 KRBA1A5PL33 1030 aa20.61■□□□□ 0.89
USP11-205ENST00000467378 PPEF2O14830 753 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms