RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 PARVGQ9HBI0 331 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 GABRQQ9UN88 632 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 TRAF3IP3Q9Y228 551 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 MCM3APO60318 1980 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 CASP8AP2Q9UKL3 1982 aa6.03□□□□□ -1.44
VPS41-211ENST00000466017 PHLPP2Q6ZVD8 1323 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.02□□□□□ -1.45
VPS41-211ENST00000466017 PDXKO00764 312 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 MSCO60682 206 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 LRRN2O75325 713 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 FGFR1OPO95684 399 aaKnown RBP6.02□□□□□ -1.45
VPS41-211ENST00000466017 LGALS2P05162 132 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 SSBP05455 408 aaKnown RBP eCLIP6.02□□□□□ -1.45
VPS41-211ENST00000466017 KRT18P05783 430 aaKnown RBP6.02□□□□□ -1.45
VPS41-211ENST00000466017 MMP3P08254 477 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 PLS3P13797 630 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 IDEP14735 1019 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 ZNF18P17022 549 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 CST5P28325 142 aaPredicted RBP6.02□□□□□ -1.45
VPS41-211ENST00000466017 CYP2C19P33261 490 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 CPT1AP50416 773 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 NCKAP1LP55160 1127 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 ADAM17P78536 824 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 CDC42EP1Q00587 391 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 PRKCEQ02156 737 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 LRRC63Q05C16 580 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 ENPEPQ07075 957 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 SPAG1Q07617 926 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 PAK1Q13153 545 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 DHX8Q14562 1220 aaKnown RBP6.02□□□□□ -1.45
VPS41-211ENST00000466017 PLCB4Q15147 1175 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 PPP2R5AQ15172 486 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 CCL14Q16627 93 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 EDRF1Q3B7T1 1238 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 TTI2Q6NXR4 508 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 LETMD1Q6P1Q0 360 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 FAM43BQ6ZT52 329 aaPredicted RBP6.02□□□□□ -1.45
VPS41-211ENST00000466017 CBLL1Q75N03 491 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 FILIP1Q7Z7B0 1213 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 MCATQ8IVS2 390 aaKnown RBP6.02□□□□□ -1.45
VPS41-211ENST00000466017 TP53INP2Q8IXH6 220 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 MRPL41Q8IXM3 137 aaKnown RBP6.02□□□□□ -1.45
VPS41-211ENST00000466017 C12orf56Q8IXR9 622 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 MYOCDQ8IZQ8 938 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 DAW1Q8N136 415 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 DNAJC5GQ8N7S2 189 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 KLHDC9Q8NEP7 349 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 OR6J1Q8NGC5 347 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 DNAJB8Q8NHS0 232 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 ZNF296Q8WUU4 475 aaPredicted RBP6.02□□□□□ -1.45
VPS41-211ENST00000466017 AFG1LQ8WV93 481 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 TCP11Q8WWU5 503 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 TRIB2Q92519 343 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 COPS5Q92905 334 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 P2RX5Q93086 422 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 MED15Q96RN5 788 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 SEZ6LQ9BYH1 1024 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 AP5M1Q9H0R1 490 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 HSD3B7Q9H2F3 369 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 KCTD10Q9H3F6 313 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 THAP9Q9H5L6 903 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 TMEM206Q9H813 350 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 GGT7Q9UJ14 662 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 ZNF215Q9UL58 517 aaPredicted RBP6.02□□□□□ -1.45
VPS41-211ENST00000466017 GDAQ9Y2T3 454 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 TELO2Q9Y4R8 837 aa6.02□□□□□ -1.45
VPS41-211ENST00000466017 A0A087WWV3 80 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.01□□□□□ -1.45
VPS41-211ENST00000466017 ZEB2O60315 1214 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 HIP1RO75146 1068 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 TBCAO75347 108 aaKnown RBP6.01□□□□□ -1.45
VPS41-211ENST00000466017 GNA14O95837 355 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 CBX7O95931 251 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 F2P00734 622 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 HMGCRP04035 888 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 RPLP2P05387 115 aaKnown RBP6.01□□□□□ -1.45
VPS41-211ENST00000466017 EIF4A3P38919 411 aaKnown RBP6.01□□□□□ -1.45
VPS41-211ENST00000466017 NAMPTP43490 491 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 NPEPPSP55786 919 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 FKBP3Q00688 224 aaKnown RBP6.01□□□□□ -1.45
VPS41-211ENST00000466017 CAP1Q01518 475 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 PRKCZQ05513 592 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 GRM1Q13255 1194 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 MXD4Q14582 209 aaPredicted RBP6.01□□□□□ -1.45
VPS41-211ENST00000466017 KNOP1Q1ED39 458 aaKnown RBP6.01□□□□□ -1.45
VPS41-211ENST00000466017 ZCWPW2Q504Y3 356 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 ZNF394Q53GI3 561 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 PRAMEF19Q5SWL8 479 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 TMEM63BQ5T3F8 832 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 CDKAL1Q5VV42 579 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 ANKRD40Q6AI12 368 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 ISM2Q6H9L7 571 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 CCSAPQ6IQ19 270 aaPredicted RBP6.01□□□□□ -1.45
VPS41-211ENST00000466017 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.01□□□□□ -1.45
VPS41-211ENST00000466017 LUZP1Q86V48 1076 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 SESTD1Q86VW0 696 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 FAM178BQ8IXR5 827 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 MYCT1Q8N699 235 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 LINC01465Q8N7H1 131 aa6.01□□□□□ -1.45
VPS41-211ENST00000466017 TRPV1Q8NER1 839 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 893.8 ms