RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 CORO1CQ9ULV4 474 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 KAT6AQ92794 2004 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 A6NHS1 94 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 PPP1R12AO14974 1030 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 LIASO43766 372 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 CYP1A1P04798 512 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 SESN3P58005 492 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 RPL7AP62424 266 aaKnown RBP12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 MAMLD1Q13495 774 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 FAM182AQ5T1J6 154 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 TXNRD3NBQ6F5E7 133 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 PRR11Q96HE9 360 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 KLF6Q99612 283 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 DCTN4Q9UJW0 460 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 ZNF148Q9UQR1 794 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 PTPRJQ12913 1337 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 DPPA5A6NC42 116 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 SPDYE5A6NIY4 337 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 GOLGA8RI6L899 631 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 PSTPIP1O43586 416 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 TYROBPO43914 113 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 ADRA1DP25100 572 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 PTDSS1P48651 473 aaKnown RBP12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 STRIP1Q5VSL9 837 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 MFSD7Q6UXD7 560 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 NLRP9Q7RTR0 991 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 MTDHQ86UE4 582 aaKnown RBP12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 CCDC125Q86Z20 511 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 KATNAL2Q8IYT4 538 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 RIBC1Q8N443 379 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 BBOF1Q8ND07 529 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 RFWD2Q8NHY2 731 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 ALG13Q9NP73 1137 aaKnown RBP12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 C1orf112Q9NSG2 853 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 ZFATQ9P243 1243 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 KANSL3Q9P2N6 904 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 CCPG1Q9ULG6 757 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 TELO2Q9Y4R8 837 aa12.41□□□□□ -0.42
PDZRN3-203ENST00000462146 ARID2Q68CP9 1835 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 TLR3O15455 904 aaKnown RBP12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 CCNE2O96020 404 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 POTEJP0CG39 1038 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 KRT4P19013 534 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 EIF2AK2P19525 551 aaKnown RBP12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 NFX1Q12986 1120 aaKnown RBP12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 DGKZQ13574 1117 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 MTMR1Q13613 665 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 OGFOD1Q8N543 542 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 ZNF75CPQ92670 426 aaPredicted RBP12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 INPP5DQ92835 1189 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 ZNF622Q969S3 477 aaKnown RBP eCLIP12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 CYLDQ9NQC7 956 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 KMT5AQ9NQR1 393 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 ZFP69BQ9UJL9 534 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 LRRC42Q9Y546 428 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 ZNF536O15090 1300 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 DCTN3O75935 186 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 NPR1P16066 1061 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 HSD17B4P51659 736 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 NOMO3P69849 1222 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 GCNT1Q02742 428 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 PDIA2Q13087 525 aaKnown RBP12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 HHATQ5VTY9 493 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 ANO5Q75V66 913 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 NLRX1Q86UT6 975 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 CPXCR1Q8N123 301 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 TMEM121Q9BTD3 319 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 SERPINA10Q9UK55 444 aa12.4□□□□□ -0.42
PDZRN3-203ENST00000462146 HNRNPDLO14979 420 aaKnown RBP12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 SSTR1P30872 391 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 PCK1P35558 622 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 GPX6P59796 221 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 PTP4A2Q12974 167 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 DMP1Q13316 513 aaPredicted RBP12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 CTC1Q2NKJ3 1217 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 WDR72Q3MJ13 1102 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 CC2D2BQ6DHV5 1058 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 ARMC2Q8NEN0 867 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 EXD1Q8NHP7 514 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 ASAP3Q8TDY4 903 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 CHURC1Q8WUH1 139 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 FBXL18Q96ME1 805 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 SAE1Q9UBE0 346 aaPredicted RBP12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 EXOC7Q9UPT5 735 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 PCDHB2Q9Y5E7 798 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 KIAA1217Q5T5P2 1943 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 ATP5HO75947 161 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 IFNB1P01574 187 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 MYCLP12524 364 aaPredicted RBP12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 ATP4AP20648 1035 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 SATB1Q01826 763 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 ZNF252P-AS1Q0IIN9 211 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 KHDC1Q4VXA5 237 aaKnown RBP12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 TDRD10Q5VZ19 366 aaKnown RBP12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 TMEM270Q6UE05 265 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 DSTYKQ6XUX3 929 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 RGS9BPQ6ZS82 235 aa12.39□□□□□ -0.43
PDZRN3-203ENST00000462146 GPD1LQ8N335 351 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms