RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SIX5Q8N196 739 aa20.45■□□□□ 0.86
COL5A1-203ENST00000460264 TMEM105Q8N8V8 129 aa20.45■□□□□ 0.86
COL5A1-203ENST00000460264 PGLYRP2Q96PD5 576 aa20.45■□□□□ 0.86
COL5A1-203ENST00000460264 RPP25Q9BUL9 199 aaKnown RBP20.45■□□□□ 0.86
COL5A1-203ENST00000460264 PCIF1Q9H4Z3 704 aa20.45■□□□□ 0.86
COL5A1-203ENST00000460264 WNT16Q9UBV4 365 aa20.45■□□□□ 0.86
COL5A1-203ENST00000460264 YIPF1Q9Y548 306 aa20.45■□□□□ 0.86
COL5A1-203ENST00000460264 CACNA1HO95180 2353 aa20.44■□□□□ 0.86
COL5A1-203ENST00000460264 CEBPBP17676 345 aa20.44■□□□□ 0.86
COL5A1-203ENST00000460264 CASP1P29466 404 aa20.44■□□□□ 0.86
COL5A1-203ENST00000460264 TFAMQ00059 246 aaKnown RBP20.44■□□□□ 0.86
COL5A1-203ENST00000460264 EHHADHQ08426 723 aa20.44■□□□□ 0.86
COL5A1-203ENST00000460264 TCF15Q12870 199 aa20.44■□□□□ 0.86
COL5A1-203ENST00000460264 PRSS36Q5K4E3 855 aa20.44■□□□□ 0.86
COL5A1-203ENST00000460264 UNC13DQ70J99 1090 aa20.44■□□□□ 0.86
COL5A1-203ENST00000460264 OR10T2Q8NGX3 314 aa20.44■□□□□ 0.86
COL5A1-203ENST00000460264 NOC3LQ8WTT2 800 aaKnown RBP20.44■□□□□ 0.86
COL5A1-203ENST00000460264 TMEM209Q96SK2 561 aa20.44■□□□□ 0.86
COL5A1-203ENST00000460264 PYM1Q9BRP8 204 aaKnown RBP20.44■□□□□ 0.86
COL5A1-203ENST00000460264 CRISPLD1Q9H336 500 aa20.44■□□□□ 0.86
COL5A1-203ENST00000460264 GDE1Q9NZC3 331 aa20.44■□□□□ 0.86
COL5A1-203ENST00000460264 CEP72Q9P209 647 aa20.44■□□□□ 0.86
COL5A1-203ENST00000460264 DSEQ9UL01 958 aa20.44■□□□□ 0.86
COL5A1-203ENST00000460264 ZDHHC9Q9Y397 364 aa20.44■□□□□ 0.86
COL5A1-203ENST00000460264 CYB561D2O14569 222 aa20.43■□□□□ 0.86
COL5A1-203ENST00000460264 KIAA0391O15091 583 aaKnown RBP20.43■□□□□ 0.86
COL5A1-203ENST00000460264 NPR3P17342 541 aa20.43■□□□□ 0.86
COL5A1-203ENST00000460264 CLCN5P51795 746 aa20.43■□□□□ 0.86
COL5A1-203ENST00000460264 PTPN5P54829 565 aa20.43■□□□□ 0.86
COL5A1-203ENST00000460264 SV2CQ496J9 727 aa20.43■□□□□ 0.86
COL5A1-203ENST00000460264 GPD1LQ8N335 351 aa20.43■□□□□ 0.86
COL5A1-203ENST00000460264 ELMOD1Q8N336 334 aa20.43■□□□□ 0.86
COL5A1-203ENST00000460264 C1orf127Q8N9H9 656 aa20.43■□□□□ 0.86
COL5A1-203ENST00000460264 FLCNQ8NFG4 579 aa20.43■□□□□ 0.86
COL5A1-203ENST00000460264 GPR152Q8TDT2 470 aa20.43■□□□□ 0.86
COL5A1-203ENST00000460264 TCEAL4Q96EI5 215 aa20.43■□□□□ 0.86
COL5A1-203ENST00000460264 BORCS6Q96GS4 357 aa20.43■□□□□ 0.86
COL5A1-203ENST00000460264 FAM84AQ96KN4 292 aa20.43■□□□□ 0.86
COL5A1-203ENST00000460264 ZNF560Q96MR9 790 aa20.43■□□□□ 0.86
COL5A1-203ENST00000460264 BLZF1Q9H2G9 400 aa20.43■□□□□ 0.86
COL5A1-203ENST00000460264 PDE11AQ9HCR9 933 aa20.43■□□□□ 0.86
COL5A1-203ENST00000460264 SLC2A4RGQ9NR83 387 aa20.43■□□□□ 0.86
COL5A1-203ENST00000460264 MTMR11A4FU01 709 aa20.42■□□□□ 0.86
COL5A1-203ENST00000460264 KRBA1A5PL33 1030 aa20.42■□□□□ 0.86
COL5A1-203ENST00000460264 KPNA7A9QM74 516 aa20.42■□□□□ 0.86
COL5A1-203ENST00000460264 TULP1O00294 542 aaPredicted RBP20.42■□□□□ 0.86
COL5A1-203ENST00000460264 NRG2O14511 850 aaPredicted RBP20.42■□□□□ 0.86
COL5A1-203ENST00000460264 ITGB3P05106 788 aa20.42■□□□□ 0.86
COL5A1-203ENST00000460264 POLR2BP30876 1174 aaKnown RBP20.42■□□□□ 0.86
COL5A1-203ENST00000460264 HOXD11P31277 338 aaPredicted RBP20.42■□□□□ 0.86
COL5A1-203ENST00000460264 CCR2P41597 374 aa20.42■□□□□ 0.86
COL5A1-203ENST00000460264 AFMP43652 599 aa20.42■□□□□ 0.86
COL5A1-203ENST00000460264 NUBP1P53384 320 aa20.42■□□□□ 0.86
COL5A1-203ENST00000460264 DUSP4Q13115 394 aa20.42■□□□□ 0.86
COL5A1-203ENST00000460264 IQCEQ6IPM2 695 aa20.42■□□□□ 0.86
COL5A1-203ENST00000460264 POTEHQ6S545 545 aa20.42■□□□□ 0.86
COL5A1-203ENST00000460264 PDZD4Q76G19 769 aaPredicted RBP20.42■□□□□ 0.86
COL5A1-203ENST00000460264 TTC9BQ8N6N2 239 aa20.42■□□□□ 0.86
COL5A1-203ENST00000460264 ZNF507Q8TCN5 953 aa20.42■□□□□ 0.86
COL5A1-203ENST00000460264 MCRS1Q96EZ8 462 aa20.42■□□□□ 0.86
COL5A1-203ENST00000460264 CHAMP1Q96JM3 812 aa20.42■□□□□ 0.86
COL5A1-203ENST00000460264 ZNF512Q96ME7 567 aaPredicted RBP20.42■□□□□ 0.86
COL5A1-203ENST00000460264 KXD1Q9BQD3 176 aa20.42■□□□□ 0.86
COL5A1-203ENST00000460264 RTP3Q9BQQ7 232 aa20.42■□□□□ 0.86
COL5A1-203ENST00000460264 CA14Q9ULX7 337 aa20.42■□□□□ 0.86
COL5A1-203ENST00000460264 UBE4BO95155 1302 aa20.42■□□□□ 0.86
COL5A1-203ENST00000460264 ZNF197O14709 1029 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 MICAL2O94851 1124 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 AOC1P19801 751 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 PNPLA4P41247 253 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 EPHA5P54756 1037 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 CYP4A22Q5TCH4 519 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 WSCD1Q658N2 575 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 CENPPQ6IPU0 288 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 METTL23Q86XA0 190 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 CBWD2Q8IUF1 395 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 GRAMD1CQ8IYS0 662 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 HS6ST3Q8IZP7 471 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 ATAD1Q8NBU5 361 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 CXorf38Q8TB03 319 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 CACTINQ8WUQ7 758 aaKnown RBP20.41■□□□□ 0.86
COL5A1-203ENST00000460264 LEO1Q8WVC0 666 aaPredicted RBP20.41■□□□□ 0.86
COL5A1-203ENST00000460264 SCFD1Q8WVM8 642 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 DNAJC25Q9H1X3 360 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 ASAH2Q9NR71 780 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 ARHGEF3Q9NR81 526 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 HSPBP1Q9NZL4 362 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 ITGA11Q9UKX5 1188 aa20.41■□□□□ 0.86
COL5A1-203ENST00000460264 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.4■□□□□ 0.86
COL5A1-203ENST00000460264 PVALEFA0A1B0GWK0 134 aa20.4■□□□□ 0.86
COL5A1-203ENST00000460264 TGFB1I1O43294 461 aa20.4■□□□□ 0.86
COL5A1-203ENST00000460264 GALR2O43603 387 aaPredicted RBP20.4■□□□□ 0.86
COL5A1-203ENST00000460264 ACTN4O43707 911 aaKnown RBP20.4■□□□□ 0.86
COL5A1-203ENST00000460264 SLFN14P0C7P3 912 aa20.4■□□□□ 0.86
COL5A1-203ENST00000460264 KRT85P78386 507 aa20.4■□□□□ 0.86
COL5A1-203ENST00000460264 PTPRJQ12913 1337 aa20.4■□□□□ 0.86
COL5A1-203ENST00000460264 PLD1Q13393 1074 aa20.4■□□□□ 0.86
COL5A1-203ENST00000460264 CUL4BQ13620 913 aa20.4■□□□□ 0.86
COL5A1-203ENST00000460264 SCARA3Q6AZY7 606 aa20.4■□□□□ 0.86
COL5A1-203ENST00000460264 CEP57L1Q8IYX8 460 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms