RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 TPP1O14773 563 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 FRS3O43559 492 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 PRC1O43663 620 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 AHSGP02765 367 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 CFIP05156 583 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 FCER1AP12319 257 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 RHCEP18577 417 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 LAG3P18627 525 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 KRT4P19013 534 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 FGFR4P22455 802 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 MCM7P33993 719 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 GNALP38405 381 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 GDF5P43026 501 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 PSMC1P62191 440 aaKnown RBP4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 RHDQ02161 417 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 OCA2Q04671 838 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 PIGFQ07326 219 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 ZNF844Q08AG5 666 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 LLGL1Q15334 1064 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 B3GNTL1Q67FW5 361 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 DARS2Q6PI48 645 aaKnown RBP4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 MAPKAPK5Q8IW41 473 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 SYNE4Q8N205 404 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 SLC17A8Q8NDX2 589 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 TMIEQ8NEW7 156 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 MARS2Q96GW9 593 aaKnown RBP4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 IMPG2Q9BZV3 1241 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 VSX1Q9NZR4 365 aaPredicted RBP4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 HSFX1Q9UBD0 423 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 STAP2Q9UGK3 403 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 CPA4Q9UI42 421 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 KCNE5Q9UJ90 142 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 PCDHA6Q9UN73 950 aa4.61□□□□□ -1.67
TRAPPC13-204ENST00000438419 AATKQ6ZMQ8 1374 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 PRSS29PA6NIE9 313 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 GOLIM4O00461 696 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 CYR61O00622 381 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 CAND2O75155 1236 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 GPANK1O95872 356 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 BMPR1AP36894 532 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 ZNF135P52742 658 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 SOX8P57073 446 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 EXOSC9Q06265 439 aaKnown RBP4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 HABP2Q14520 560 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 CNN3Q15417 329 aaKnown RBP4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 SPDYE7PQ495Y7 208 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 TIGD2Q4W5G0 525 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 CYB5RLQ6IPT4 315 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 CCSAPQ6IQ19 270 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 CCDC146Q8IYE0 955 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 ULK2Q8IYT8 1036 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 TMEM132CQ8N3T6 1108 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 FAM156AQ8NDB6 213 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 CPEB3Q8NE35 698 aaKnown RBP4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 PROKR1Q8TCW9 393 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 NEU4Q8WWR8 484 aaPredicted RBP4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 TIFAQ96CG3 184 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 CNPPD1Q9BV87 410 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 TLR10Q9BXR5 811 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 ZMAT3Q9HA38 289 aaKnown RBP4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 ANKFY1Q9P2R3 1169 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 USP25Q9UHP3 1055 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 CDYLQ9Y232 598 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 NEU2Q9Y3R4 380 aa4.6□□□□□ -1.67
TRAPPC13-204ENST00000438419 CFAP69A5D8W1 941 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 MGEA5O60502 916 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 ADH4P08319 380 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 NPR1P16066 1061 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 PHKA1P46020 1223 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 KCNJ5P48544 419 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 POU6F2P78424 691 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 HSD11B2P80365 405 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 PURAQ00577 322 aaKnown RBP4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 RESTQ13127 1097 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 GALEQ14376 348 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 POLD3Q15054 466 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 KIAA0753Q2KHM9 967 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 RNF220Q5VTB9 566 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 SWSAP1Q6NVH7 229 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 USP51Q70EK9 711 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 VRK3Q8IV63 474 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 ARHGEF19Q8IW93 802 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 AMER2Q8N7J2 671 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 Q8NA96 180 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 PDPRQ8NCN5 879 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 KBTBD7Q8WVZ9 684 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 LRTOMTQ8WZ04 291 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 MRGPRX1Q96LB2 322 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 NT5C1BQ96P26 610 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 SMOQ99835 787 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 TINAGL1Q9GZM7 467 aaPredicted RBP4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 DDX21Q9NR30 783 aaKnown RBP eCLIP4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 MED16Q9Y2X0 877 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 MTO1Q9Y2Z2 717 aaKnown RBP4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 NOX1Q9Y5S8 564 aa4.59□□□□□ -1.67
TRAPPC13-204ENST00000438419 CCDC195A0A1B0GUA6 201 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 CCDC194A0A1B0GVG4 234 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 UNC119BA6NIH7 251 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 E9PLN8 166 aa4.58□□□□□ -1.68
TRAPPC13-204ENST00000438419 ERN1O75460 977 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms