RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SCAMP4Q969E2 229 aa5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 TTPALQ9BTX7 342 aa5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 GALNT9Q9HCQ5 603 aa5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 ETAA1Q9NY74 926 aa5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 RNF181Q9P0P0 153 aa5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 PCDHA6Q9UN73 950 aa5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 NOX1Q9Y5S8 564 aa5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 POLR2AP24928 1970 aaKnown RBP5.73□□□□□ -1.49
HMGB1P49-201ENST00000418882 A0A1W2PS29 197 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 FOXN1O15353 648 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 ERN1O75460 977 aaKnown RBP5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 KIF20AO95235 890 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 FOSP01100 380 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 RARBP10826 455 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 KCNA2P16389 499 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 FSTL1Q12841 308 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 FOXI1Q12951 378 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 BOP1Q14137 746 aaKnown RBP5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 MLC1Q15049 377 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 CD300EQ496F6 205 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 CCDC157Q569K6 752 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 LAIR1Q6GTX8 287 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 FOXR2Q6PJQ5 311 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 FAM43AQ8N2R8 423 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 TMEM125Q96AQ2 219 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 CDK5RAP3Q96JB5 506 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 MRGPRX1Q96LB2 322 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 MED15Q96RN5 788 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 AGAP2Q99490 1192 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 MRIQ9BWK5 157 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 TINAGL1Q9GZM7 467 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 SMOC2Q9H3U7 446 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 RLIMQ9NVW2 624 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 CFAP97Q9P2B7 532 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 EPN1Q9Y6I3 576 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 SALL3Q9BXA9 1300 aa5.72□□□□□ -1.49
HMGB1P49-201ENST00000418882 A0A088AWK7 358 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 PPFIA4O75335 1185 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 TUSC2O75896 110 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 DNAJB5O75953 348 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 ANXA1P04083 346 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 GNAI3P08754 354 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 CHRM3P20309 590 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 GATA3P23771 443 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 GNAI1P63096 354 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 DPTQ07507 201 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 HABP2Q14520 560 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 SPDYE7PQ495Y7 208 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 PPP1R32Q7Z5V6 425 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 C14orf80Q86SX3 495 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 GPR150Q8NGU9 434 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 LINC00476Q8WZB0 136 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 CHFRQ96EP1 664 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 FAM167AQ96KS9 214 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 Q96MF0 132 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 B3GNT5Q9BYG0 378 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 ATP6V0A4Q9HBG4 840 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 GNL3LQ9NVN8 582 aaKnown RBP5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 ZDHHC8Q9ULC8 765 aa5.71□□□□□ -1.5
HMGB1P49-201ENST00000418882 PRAMEF33A0A0G2JMD5 474 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 CCDC195A0A1B0GUA6 201 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 MYADML2A6NDP7 307 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 PRAMEF10O60809 474 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 IL12RB1P42701 662 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 AGFG1P52594 562 aaKnown RBP5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 SOX8P57073 446 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 POU6F2P78424 691 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 ZNF844Q08AG5 666 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 TCF15Q12870 199 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 GALEQ14376 348 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 HECTD2Q5U5R9 776 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 EMC10Q5UCC4 262 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 ARMC6Q6NXE6 501 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 NPNTQ6UXI9 565 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 SLC30A10Q6XR72 485 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 ADGRG5Q8IZF4 528 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 PCSK9Q8NBP7 692 aaKnown RBP5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 POC1BQ8TC44 478 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 SSH3Q8TE77 659 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 TRIB1Q96RU8 372 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 ZMAT3Q9HA38 289 aaKnown RBP5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 TCEAL9Q9UHQ7 104 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 CPA4Q9UI42 421 aa5.7□□□□□ -1.5
HMGB1P49-201ENST00000418882 M0QYG6 137 aa5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 POLRMTO00411 1230 aaKnown RBP5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 CTNND1O60716 968 aaKnown RBP5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 VPS4BO75351 444 aa5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 PARNO95453 639 aaKnown RBP5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 NPR1P16066 1061 aa5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 FDXRP22570 491 aa5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 PLA2G5P39877 138 aa5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 SEC24CP53992 1094 aa5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 DYRK1AQ13627 763 aa5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 KHDC1LQ5JSQ8 128 aa5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 ABHD17BQ5VST6 288 aa5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 TAF2Q6P1X5 1199 aa5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 MRGPRGQ86SM5 289 aa5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 USP37Q86T82 979 aa5.69□□□□□ -1.5
HMGB1P49-201ENST00000418882 FMNL3Q8IVF7 1028 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms