RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 NAA20P61599 178 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 KDSRQ06136 332 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 TRIM28Q13263 835 aaKnown RBP13.49□□□□□ -0.25
HERC3-203ENST00000407637 MTMR2Q13614 643 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 PAOXQ6QHF9 649 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 Q6ZNX1 250 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 NANOGNBQ7Z5D8 188 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 GPBP1Q86WP2 473 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 FAM186BQ8IYM0 893 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 SRPK1Q96SB4 655 aaKnown RBP13.49□□□□□ -0.25
HERC3-203ENST00000407637 TSSK1BQ9BXA7 367 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 RAB34Q9BZG1 259 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 SENP6Q9GZR1 1112 aaPredicted RBP13.49□□□□□ -0.25
HERC3-203ENST00000407637 WNT8AQ9H1J5 351 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 ACP6Q9NPH0 428 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 IL17RBQ9NRM6 502 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 DDX25Q9UHL0 483 aaKnown RBP13.49□□□□□ -0.25
HERC3-203ENST00000407637 PCDHGB4Q9UN71 923 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 MTO1Q9Y2Z2 717 aaKnown RBP13.49□□□□□ -0.25
HERC3-203ENST00000407637 PCDHGB5Q9Y5G0 923 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 STK24Q9Y6E0 443 aa13.49□□□□□ -0.25
HERC3-203ENST00000407637 LAMB2P55268 1798 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 LRRN2O75325 713 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 FTLP02792 175 aaPredicted RBP13.48□□□□□ -0.25
HERC3-203ENST00000407637 ALDH2P05091 517 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 HADHBP55084 474 aaKnown RBP13.48□□□□□ -0.25
HERC3-203ENST00000407637 CAV1Q03135 178 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 ARHGAP44Q17R89 818 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 ESCO1Q5FWF5 840 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 ZNF746Q6NUN9 644 aaPredicted RBP13.48□□□□□ -0.25
HERC3-203ENST00000407637 UIMC1Q96RL1 719 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 RBM15Q96T37 977 aaKnown RBP eCLIP13.48□□□□□ -0.25
HERC3-203ENST00000407637 LZTS1Q9Y250 596 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 AP1G1O43747 822 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 FKBP6O75344 327 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 ABHD2P08910 425 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 MYL2P10916 166 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 FOLH1Q04609 750 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 SEPT7Q16181 437 aaKnown RBP13.48□□□□□ -0.25
HERC3-203ENST00000407637 HSP90AA5PQ58FG0 334 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 IZUMO3Q5VZ72 239 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 ZNF276Q8N554 614 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 PIP4K2CQ8TBX8 421 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 MRPL1Q9BYD6 325 aaKnown RBP13.48□□□□□ -0.25
HERC3-203ENST00000407637 MANSC1Q9H8J5 431 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 C6orf50Q9HD87 102 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 SAYSD1Q9NPB0 183 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 DOLKQ9UPQ8 538 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 TBX22Q9Y458 520 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 LRP5O75197 1615 aa13.48□□□□□ -0.25
HERC3-203ENST00000407637 MEI4A8MW99 385 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 P4HA2O15460 535 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 CAMTA2O94983 1202 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 KRT18P05783 430 aaKnown RBP13.47□□□□□ -0.25
HERC3-203ENST00000407637 PDE1BQ01064 536 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 ACAP1Q15027 740 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 TRIP10Q15642 601 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 PCNX4Q63HM2 1172 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 TMC7Q7Z402 723 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 GFM2Q969S9 779 aaKnown RBP13.47□□□□□ -0.25
HERC3-203ENST00000407637 GCNAQ96QF7 691 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 FAM118BQ9BPY3 351 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 SENP1Q9P0U3 644 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 TRPM3Q9HCF6 1732 aaPredicted RBP13.47□□□□□ -0.25
HERC3-203ENST00000407637 DLDP09622 509 aaKnown RBP13.47□□□□□ -0.25
HERC3-203ENST00000407637 GSTT2P0CG29 244 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 GSTT2BP0CG30 244 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 PMLP29590 882 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 HOXD13P35453 343 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 RXRGP48443 463 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 RELAQ04206 551 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 FASTKD3Q14CZ7 662 aaKnown RBP13.47□□□□□ -0.25
HERC3-203ENST00000407637 TLR1Q15399 786 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 KCTD21Q4G0X4 260 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 ADGRG6Q86SQ4 1221 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 REXO1Q8N1G1 1221 aaKnown RBP13.47□□□□□ -0.25
HERC3-203ENST00000407637 CFAP57Q96MR6 1250 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 HERPUD2Q9BSE4 406 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 UBA5Q9GZZ9 404 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 SLC17A7Q9P2U7 560 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 PCDHB13Q9Y5F0 798 aa13.47□□□□□ -0.25
HERC3-203ENST00000407637 GOLGA8RI6L899 631 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 FBP2O00757 339 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 WDR46O15213 610 aaKnown RBP13.46□□□□□ -0.25
HERC3-203ENST00000407637 CLIC2O15247 247 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 PDGFRBP09619 1106 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 KIF22Q14807 665 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 ADRM1Q16186 407 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 PDCD4Q53EL6 469 aaKnown RBP13.46□□□□□ -0.25
HERC3-203ENST00000407637 MAP3K21Q5TCX8 1036 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 KIF6Q6ZMV9 814 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 NLRP10Q86W26 655 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 SLC26A7Q8TE54 656 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 GIPC3Q8TF64 312 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 KCPQ6ZWJ8 1503 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 FAM237BA0A1B0GVD1 139 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 ARHGAP10A1A4S6 786 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 SH3PXD2BA1X283 911 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 NR3C1P04150 777 aa13.46□□□□□ -0.25
HERC3-203ENST00000407637 TFPTP0C1Z6 253 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms