RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 SGSM1Q2NKQ1 1148 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 CACNA2D3Q8IZS8 1091 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 CCDC89Q8N998 374 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 RNF149Q8NC42 400 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 ATXN2LQ8WWM7 1075 aaKnown RBP17.86■□□□□ 0.45
NUP50-203ENST00000407019 SEC16BQ96JE7 1060 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 MPHOSPH6Q99547 160 aaKnown RBP17.86■□□□□ 0.45
NUP50-203ENST00000407019 C2orf40Q9H1Z8 148 aa17.86■□□□□ 0.45
NUP50-203ENST00000407019 TMEM191CA6NGB0 347 aa17.85■□□□□ 0.45
NUP50-203ENST00000407019 TMEM191BP0C7N4 346 aa17.85■□□□□ 0.45
NUP50-203ENST00000407019 BRD2P25440 801 aaKnown RBP17.85■□□□□ 0.45
NUP50-203ENST00000407019 VPS41P49754 854 aa17.85■□□□□ 0.45
NUP50-203ENST00000407019 DUOXA2Q1HG44 320 aa17.85■□□□□ 0.45
NUP50-203ENST00000407019 GKAP1Q5VSY0 366 aaPredicted RBP17.85■□□□□ 0.45
NUP50-203ENST00000407019 EXOC8Q8IYI6 725 aa17.85■□□□□ 0.45
NUP50-203ENST00000407019 LRRC71Q8N4P6 559 aa17.85■□□□□ 0.45
NUP50-203ENST00000407019 RBM41Q96IZ5 413 aaKnown RBP17.85■□□□□ 0.45
NUP50-203ENST00000407019 SERPINB12Q96P63 405 aa17.85■□□□□ 0.45
NUP50-203ENST00000407019 GPR20Q99678 358 aa17.85■□□□□ 0.45
NUP50-203ENST00000407019 INTS9Q9NV88 658 aaKnown RBP17.85■□□□□ 0.45
NUP50-203ENST00000407019 CPSF3Q9UKF6 684 aaKnown RBP17.85■□□□□ 0.45
NUP50-203ENST00000407019 NOP56O00567 594 aaKnown RBP17.84■□□□□ 0.45
NUP50-203ENST00000407019 ABLIM1O14639 778 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 LGR5O75473 907 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 FSBPO95073 299 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 ARIH2O95376 493 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 TTC4O95801 387 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 NF2P35240 595 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 RPL7AP62424 266 aaKnown RBP17.84■□□□□ 0.45
NUP50-203ENST00000407019 NFX1Q12986 1120 aaKnown RBP17.84■□□□□ 0.45
NUP50-203ENST00000407019 TRPC3Q13507 836 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 LONRF1Q17RB8 773 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 DNAJC24Q6P3W2 148 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 ANKS1BQ7Z6G8 1248 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 TRIM50Q86XT4 487 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 RCOR2Q8IZ40 523 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 TMEM35BQ8NCS4 154 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 CABS1Q96KC9 395 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 FAM118BQ9BPY3 351 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 CISHQ9NSE2 258 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 KRT1P04264 644 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 ZFYVE27Q5T4F4 411 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 KCNV1Q6PIU1 500 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 DLK2Q6UY11 383 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 CCDC121Q6ZUS5 278 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 IPO4Q8TEX9 1081 aaKnown RBP17.84■□□□□ 0.45
NUP50-203ENST00000407019 SGIP1Q9BQI5 828 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 ZNF518BQ9C0D4 1074 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 DNAJC17Q9NVM6 304 aaKnown RBP17.84■□□□□ 0.45
NUP50-203ENST00000407019 KLHL11Q9NVR0 708 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 TMEM51Q9NW97 253 aa17.84■□□□□ 0.45
NUP50-203ENST00000407019 IGKV6-21A0A0C4DH24 114 aa17.83■□□□□ 0.45
NUP50-203ENST00000407019 A0A0G2JLL6 359 aaPredicted RBP17.83■□□□□ 0.45
NUP50-203ENST00000407019 TCRBV5S1A1TA0A578 114 aa17.83■□□□□ 0.45
NUP50-203ENST00000407019 CNMDO75829 334 aa17.83■□□□□ 0.45
NUP50-203ENST00000407019 ATP5DP30049 168 aa17.83■□□□□ 0.45
NUP50-203ENST00000407019 TFAMQ00059 246 aaKnown RBP17.83■□□□□ 0.45
NUP50-203ENST00000407019 LMNB2Q03252 620 aa17.83■□□□□ 0.45
NUP50-203ENST00000407019 ZNF394Q53GI3 561 aa17.83■□□□□ 0.45
NUP50-203ENST00000407019 CELF3Q5SZQ8 465 aaKnown RBP17.83■□□□□ 0.45
NUP50-203ENST00000407019 IZUMO3Q5VZ72 239 aa17.83■□□□□ 0.45
NUP50-203ENST00000407019 PLPPR4Q7Z2D5 763 aa17.83■□□□□ 0.45
NUP50-203ENST00000407019 PRRT2Q7Z6L0 340 aaPredicted RBP17.83■□□□□ 0.45
NUP50-203ENST00000407019 MCEEQ96PE7 176 aa17.83■□□□□ 0.45
NUP50-203ENST00000407019 ZNF317Q96PQ6 595 aaPredicted RBP17.83■□□□□ 0.45
NUP50-203ENST00000407019 SLITRK1Q96PX8 696 aa17.83■□□□□ 0.45
NUP50-203ENST00000407019 CAPN7Q9Y6W3 813 aa17.83■□□□□ 0.45
NUP50-203ENST00000407019 PAPPA2Q9BXP8 1791 aa17.83■□□□□ 0.45
NUP50-203ENST00000407019 ZBTB42B2RXF5 422 aa17.83■□□□□ 0.44
NUP50-203ENST00000407019 SLC25A27O95847 323 aa17.83■□□□□ 0.44
NUP50-203ENST00000407019 HOXC6P09630 235 aa17.83■□□□□ 0.44
NUP50-203ENST00000407019 TAP1Q03518 808 aa17.83■□□□□ 0.44
NUP50-203ENST00000407019 ZNF252P-AS1Q0IIN9 211 aa17.83■□□□□ 0.44
NUP50-203ENST00000407019 ZNF699Q32M78 642 aa17.83■□□□□ 0.44
NUP50-203ENST00000407019 HSDL1Q3SXM5 330 aa17.83■□□□□ 0.44
NUP50-203ENST00000407019 CCDC38Q502W7 563 aa17.83■□□□□ 0.44
NUP50-203ENST00000407019 LRRC38Q5VT99 294 aa17.83■□□□□ 0.44
NUP50-203ENST00000407019 GPAT2Q6NUI2 795 aa17.83■□□□□ 0.44
NUP50-203ENST00000407019 DCUN1D2Q6PH85 259 aa17.83■□□□□ 0.44
NUP50-203ENST00000407019 MPZL3Q6UWV2 235 aa17.83■□□□□ 0.44
NUP50-203ENST00000407019 GSTA5Q7RTV2 222 aa17.83■□□□□ 0.44
NUP50-203ENST00000407019 EXOC3L1Q86VI1 746 aa17.83■□□□□ 0.44
NUP50-203ENST00000407019 JPH2Q9BR39 696 aaPredicted RBP17.83■□□□□ 0.44
NUP50-203ENST00000407019 ASCC2Q9H1I8 757 aaPredicted RBP17.83■□□□□ 0.44
NUP50-203ENST00000407019 CCDC134Q9H6E4 229 aa17.83■□□□□ 0.44
NUP50-203ENST00000407019 NINJ2Q9NZG7 142 aa17.83■□□□□ 0.44
NUP50-203ENST00000407019 CEP83Q9Y592 693 aa17.83■□□□□ 0.44
NUP50-203ENST00000407019 PI4K2BG5E9Z4 385 aa17.82■□□□□ 0.44
NUP50-203ENST00000407019 SOCS7O14512 581 aa17.82■□□□□ 0.44
NUP50-203ENST00000407019 IRF6O14896 467 aa17.82■□□□□ 0.44
NUP50-203ENST00000407019 KLRC2P26717 231 aa17.82■□□□□ 0.44
NUP50-203ENST00000407019 CDH5P33151 784 aaPredicted RBP17.82■□□□□ 0.44
NUP50-203ENST00000407019 PLCB4Q15147 1175 aa17.82■□□□□ 0.44
NUP50-203ENST00000407019 KYNUQ16719 465 aa17.82■□□□□ 0.44
NUP50-203ENST00000407019 SCARA5Q6ZMJ2 495 aa17.82■□□□□ 0.44
NUP50-203ENST00000407019 TSHZ1Q6ZSZ6 1077 aa17.82■□□□□ 0.44
NUP50-203ENST00000407019 RHPN2Q8IUC4 686 aa17.82■□□□□ 0.44
NUP50-203ENST00000407019 NLGN2Q8NFZ4 835 aa17.82■□□□□ 0.44
NUP50-203ENST00000407019 ELP3Q9H9T3 547 aa17.82■□□□□ 0.44
NUP50-203ENST00000407019 PCDHGC3Q9UN70 934 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms