RNA–Protein interactions for RNA: ENST00000400214.2

HMGB3P7-201, Transcript of high mobility group box 3 pseudogene 7, humanhuman

BASIC

Gene HMGB3P7, Length 611 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P7-201ENST00000400214 DPF3Q92784 378 aa5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 MAELQ96JY0 434 aaKnown RBP5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 JAKMIP1Q96N16 626 aaKnown RBP5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 PSMG3-AS1Q96PY0 264 aa5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 GAS2L1Q99501 681 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 POP1Q99575 1024 aaKnown RBP5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 CGRRF1Q99675 332 aa5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 GPATCH1Q9BRR8 931 aaKnown RBP5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 FSD1Q9BTV5 496 aa5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 TXLNGYQ9BZA5 131 aa5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 BTBD1Q9H0C5 482 aa5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 PICK1Q9NRD5 415 aa5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 DCAF16Q9NXF7 216 aa5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 MCM9Q9NXL9 1143 aa5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 WHRNQ9P202 907 aa5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 CGGBP1Q9UFW8 167 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 GPR45Q9Y5Y3 372 aa5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 SLC4A4Q9Y6R1 1079 aa5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 ZHX2Q9Y6X8 837 aa5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 ROBO3Q96MS0 1386 aa5.91□□□□□ -1.46
HMGB3P7-201ENST00000400214 ZSWIM8A7E2V4 1837 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 COL11A1P12107 1806 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 CENPFP49454 3210 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 C17orf113A0A1B0GUU1 675 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 SPDYE3A6NKU9 549 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 SPATA31C2B4DYI2 1134 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 BTBD19C9JJ37 291 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 GPR25O00155 361 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 RGS13O14921 159 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 FOXP2O15409 715 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 URI1O94763 535 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 ARHGEF15O94989 841 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 GSNP06396 782 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 PARP1P09874 1014 aaKnown RBP5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 NAT1P18440 290 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 CD247P20963 164 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 HOXC12P31275 282 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 NOP2P46087 812 aaKnown RBP5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 RNF144AP50876 292 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 PDE6CP51160 858 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 JAG1P78504 1218 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 POU4F2Q12837 409 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 SCARB2Q14108 478 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 ALX1Q15699 326 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 CERKLQ49MI3 558 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 POMZP3Q6PJE2 187 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 CYFIP1Q7L576 1253 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 MAEAQ7L5Y9 396 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 OVCH1Q7RTY7 1134 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 SAMD14Q8IZD0 417 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 ARHGEF39Q8N4T4 335 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 CRACR2BQ8N4Y2 399 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 CCDC33Q8N5R6 958 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 LILRB1Q8NHL6 650 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 STON2Q8WXE9 905 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 N4BP2L2Q92802 583 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 ELMO3Q96BJ8 720 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 C18orf8Q96DM3 657 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 RCC1LQ96I51 464 aaKnown RBP5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 CNPPD1Q9BV87 410 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 KLF16Q9BXK1 252 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 CELF4Q9BZC1 486 aaKnown RBP5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 C22orf23Q9BZE7 217 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 NKX2-4Q9H2Z4 354 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 R3HDMLQ9H3Y0 253 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 JMJD4Q9H9V9 463 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 OBP2BQ9NPH6 170 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 ORC3Q9UBD5 711 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 MTRRQ9UBK8 725 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 ARPP21Q9UBL0 812 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 ADAM30Q9UKF2 790 aa5.9□□□□□ -1.46
HMGB3P7-201ENST00000400214 ZMYM6O95789 1325 aa5.9□□□□□ -1.47
HMGB3P7-201ENST00000400214 ADGRA2Q96PE1 1338 aa5.9□□□□□ -1.47
HMGB3P7-201ENST00000400214 PLXNB2O15031 1838 aa5.9□□□□□ -1.47
HMGB3P7-201ENST00000400214 RBBP6Q7Z6E9 1792 aaKnown RBP5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 PRAMEF27A3QJZ7 478 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 LGALS16A8MUM7 142 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 DCDC2CA8MYV0 355 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 J3QW42 95 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 HIP1O00291 1037 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 IPO5O00410 1097 aaKnown RBP5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 TRIM38O00635 465 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 SHOXO15266 292 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 TLR2O60603 784 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 CLEC3AO75596 197 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 SLC4A1P02730 911 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 SCG5P05408 212 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 THP07101 528 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 CYP2D6P10635 497 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 CTSSP25774 331 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 HOXA7P31268 230 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 GUCY1A2P33402 732 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 MTNR1BP49286 362 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 BACE1P56817 501 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 UBASH3AP57075 661 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 NRG1Q02297 640 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 SPP2Q13103 211 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 CRHR2Q13324 411 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 LRP8Q14114 963 aa5.89□□□□□ -1.47
HMGB3P7-201ENST00000400214 SNX17Q15036 470 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms