RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 KLHL14Q9P2G3 628 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 C15orf41Q9Y2V0 281 aa19.44■□□□□ 0.7
PCDHA1-202ENST00000394633 PTPRFP10586 1907 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 WDR90Q96KV7 1748 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 ABHD2P08910 425 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 GARTP22102 1010 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 GCAP28676 217 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 CLNS1AP54105 237 aaKnown RBP19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 WNT7BP56706 349 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 ENPEPQ07075 957 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 ACVR2BQ13705 512 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 P3H1Q32P28 736 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 SPOPLQ6IQ16 392 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 TAS1R3Q7RTX0 852 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 ANKRD35Q8N283 1001 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 ZCCHC9Q8N567 271 aaKnown RBP19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 WNK4Q96J92 1243 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 RPAP3Q9H6T3 665 aaPredicted RBP19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 USTQ9Y2C2 406 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 STK38LQ9Y2H1 464 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 GSTTP1A0A1W2PQM5 241 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 HLA-DRAP01903 254 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 CCNB1P14635 433 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 SSTR3P32745 418 aaPredicted RBP19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 MSH2P43246 934 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 BPIFB4P59827 614 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 NOMO3P69849 1222 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 MAMLD1Q13495 774 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 NOL9Q5SY16 702 aaKnown RBP19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 MIS18BP1Q6P0N0 1132 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 ZC3H15Q8WU90 426 aaKnown RBP19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 GRAMD1AQ96CP6 724 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 CEP170P1Q96L14 293 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 PDCD2LQ9BRP1 358 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 PITPNM3Q9BZ71 974 aa19.43■□□□□ 0.7
PCDHA1-202ENST00000394633 RLFQ13129 1914 aa19.42■□□□□ 0.7
PCDHA1-202ENST00000394633 TESPA1A2RU30 521 aaPredicted RBP19.42■□□□□ 0.7
PCDHA1-202ENST00000394633 FAM47DPA6NHR8 397 aa19.42■□□□□ 0.7
PCDHA1-202ENST00000394633 ZNF862O60290 1169 aa19.42■□□□□ 0.7
PCDHA1-202ENST00000394633 ACO1P21399 889 aaKnown RBP19.42■□□□□ 0.7
PCDHA1-202ENST00000394633 LIN9Q5TKA1 542 aa19.42■□□□□ 0.7
PCDHA1-202ENST00000394633 FAM47EQ6ZV65 393 aa19.42■□□□□ 0.7
PCDHA1-202ENST00000394633 GSTA5Q7RTV2 222 aa19.42■□□□□ 0.7
PCDHA1-202ENST00000394633 RIBC1Q8N443 379 aaPredicted RBP19.42■□□□□ 0.7
PCDHA1-202ENST00000394633 GLIS1Q8NBF1 620 aa19.42■□□□□ 0.7
PCDHA1-202ENST00000394633 EXD1Q8NHP7 514 aa19.42■□□□□ 0.7
PCDHA1-202ENST00000394633 MIEF2Q96C03 454 aa19.42■□□□□ 0.7
PCDHA1-202ENST00000394633 BICD1Q96G01 975 aa19.42■□□□□ 0.7
PCDHA1-202ENST00000394633 CLMNQ96JQ2 1002 aa19.42■□□□□ 0.7
PCDHA1-202ENST00000394633 C17orf75Q9HAS0 396 aa19.42■□□□□ 0.7
PCDHA1-202ENST00000394633 DONSONQ9NYP3 566 aa19.42■□□□□ 0.7
PCDHA1-202ENST00000394633 ADAM22Q9P0K1 906 aa19.42■□□□□ 0.7
PCDHA1-202ENST00000394633 A0A1B0GUA9 196 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 SPAG7O75391 227 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 STBD1O95210 358 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 IL9RQ01113 521 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 CCDC15Q0P6D6 951 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 ZACNQ401N2 412 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 BRDTQ58F21 947 aaPredicted RBP19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 WDR44Q5JSH3 913 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 TRABD2AQ86V40 505 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 THOC1Q96FV9 657 aaKnown RBP19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 RMDN3Q96TC7 470 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 MOV10L1Q9BXT6 1211 aaKnown RBP19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 SLC38A10Q9HBR0 1119 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 SAYSD1Q9NPB0 183 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 PXMP2Q9NR77 195 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 KLHL11Q9NVR0 708 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 NOP53Q9NZM5 478 aaKnown RBP19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 MYH9P35579 1960 aaKnown RBP19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 IQCA1LA6NCM1 817 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 ASMTLO95671 621 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 C4BPAP04003 597 aaKnown RBP19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 CCND1P24385 295 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 SKIV2L2P42285 1042 aaKnown RBP19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 SSR1P43307 286 aaKnown RBP19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 CLDN10P78369 228 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 TDRD10Q5VZ19 366 aaKnown RBP19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 PLEKHA7Q6IQ23 1121 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 RSRC1Q96IZ7 334 aaKnown RBP19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 PAIP2Q9BPZ3 127 aaKnown RBP19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 FOXP3Q9BZS1 431 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 AS3MTQ9HBK9 375 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 MRPL47Q9HD33 250 aaKnown RBP19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 GABBR1Q9UBS5 961 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 SUFUQ9UMX1 484 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 AFG3L2Q9Y4W6 797 aa19.41■□□□□ 0.7
PCDHA1-202ENST00000394633 PTPRJQ12913 1337 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 EXOC1LA0A1B0GW35 172 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 DNALI1O14645 258 aaPredicted RBP19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 PIK3CAP42336 1068 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 ATP13A4Q4VNC1 1196 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 ABRAQ8N0Z2 381 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 CFAP57Q96MR6 1250 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 XPNPEP1Q9NQW7 623 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 MAP3K20Q9NYL2 800 aaKnown RBP19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 PCDHA10Q9Y5I2 948 aa19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.4■□□□□ 0.7
PCDHA1-202ENST00000394633 PCNTO95613 3336 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms