RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 KLHL11Q9NVR0 708 aa20.66■□□□□ 0.9
PCDH8-202ENST00000377942 TPX2Q9ULW0 747 aaKnown RBP20.66■□□□□ 0.9
PCDH8-202ENST00000377942 CYP24A1Q07973 514 aa20.66■□□□□ 0.9
PCDH8-202ENST00000377942 SLC30A10Q6XR72 485 aa20.66■□□□□ 0.9
PCDH8-202ENST00000377942 ULK4Q96C45 1275 aa20.66■□□□□ 0.9
PCDH8-202ENST00000377942 CARD9Q9H257 536 aa20.66■□□□□ 0.9
PCDH8-202ENST00000377942 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.66■□□□□ 0.9
PCDH8-202ENST00000377942 DSEQ9UL01 958 aa20.66■□□□□ 0.9
PCDH8-202ENST00000377942 PRG3Q9Y2Y8 225 aaPredicted RBP20.66■□□□□ 0.9
PCDH8-202ENST00000377942 ZFPM1Q8IX07 1006 aa20.65■□□□□ 0.9
PCDH8-202ENST00000377942 ALKBH8Q96BT7 664 aaKnown RBP20.65■□□□□ 0.9
PCDH8-202ENST00000377942 ATP5HO75947 161 aa20.65■□□□□ 0.9
PCDH8-202ENST00000377942 RAB6BQ9NRW1 208 aa20.65■□□□□ 0.9
PCDH8-202ENST00000377942 FOXN3O00409 490 aaPredicted RBP20.65■□□□□ 0.9
PCDH8-202ENST00000377942 ATP9BO43861 1147 aa20.65■□□□□ 0.9
PCDH8-202ENST00000377942 SPAG6O75602 509 aa20.65■□□□□ 0.9
PCDH8-202ENST00000377942 LAMTOR4Q0VGL1 99 aa20.65■□□□□ 0.9
PCDH8-202ENST00000377942 TMEM119Q4V9L6 283 aa20.65■□□□□ 0.9
PCDH8-202ENST00000377942 SEPT8Q92599 483 aa20.65■□□□□ 0.9
PCDH8-202ENST00000377942 MTG1Q9BT17 334 aaPredicted RBP20.65■□□□□ 0.9
PCDH8-202ENST00000377942 MTMR12Q9C0I1 747 aa20.65■□□□□ 0.9
PCDH8-202ENST00000377942 B3GAT3O94766 335 aa20.65■□□□□ 0.9
PCDH8-202ENST00000377942 INHBEP58166 350 aa20.65■□□□□ 0.9
PCDH8-202ENST00000377942 PDCLQ13371 301 aa20.65■□□□□ 0.9
PCDH8-202ENST00000377942 FRMD8Q9BZ67 464 aaPredicted RBP20.65■□□□□ 0.9
PCDH8-202ENST00000377942 TRIM33Q9UPN9 1127 aa20.65■□□□□ 0.9
PCDH8-202ENST00000377942 GJB7Q6PEY0 223 aa20.64■□□□□ 0.9
PCDH8-202ENST00000377942 TAS2R42Q7RTR8 314 aa20.64■□□□□ 0.9
PCDH8-202ENST00000377942 C1orf131Q8NDD1 294 aaKnown RBP20.64■□□□□ 0.9
PCDH8-202ENST00000377942 ZNF507Q8TCN5 953 aa20.64■□□□□ 0.9
PCDH8-202ENST00000377942 PPWD1Q96BP3 646 aaKnown RBP20.64■□□□□ 0.9
PCDH8-202ENST00000377942 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.64■□□□□ 0.9
PCDH8-202ENST00000377942 G3BP2Q9UN86 482 aaKnown RBP20.64■□□□□ 0.9
PCDH8-202ENST00000377942 MCF2P10911 925 aa20.64■□□□□ 0.89
PCDH8-202ENST00000377942 INSRRP14616 1297 aa20.64■□□□□ 0.89
PCDH8-202ENST00000377942 CASP4P49662 377 aa20.64■□□□□ 0.89
PCDH8-202ENST00000377942 POU5F1BQ06416 359 aa20.64■□□□□ 0.89
PCDH8-202ENST00000377942 TDRD10Q5VZ19 366 aaKnown RBP20.64■□□□□ 0.89
PCDH8-202ENST00000377942 METTL5Q9NRN9 209 aaKnown RBP20.64■□□□□ 0.89
PCDH8-202ENST00000377942 ABCF3Q9NUQ8 709 aa20.64■□□□□ 0.89
PCDH8-202ENST00000377942 KLK14Q9P0G3 267 aa20.64■□□□□ 0.89
PCDH8-202ENST00000377942 PPARGC1AQ9UBK2 798 aaKnown RBP20.64■□□□□ 0.89
PCDH8-202ENST00000377942 SH3BP1Q9Y3L3 701 aa20.64■□□□□ 0.89
PCDH8-202ENST00000377942 FAM86B1E9PN63 330 aa20.64■□□□□ 0.89
PCDH8-202ENST00000377942 GRAP2O75791 330 aa20.64■□□□□ 0.89
PCDH8-202ENST00000377942 FAM86B2P0C5J1 330 aa20.64■□□□□ 0.89
PCDH8-202ENST00000377942 SESN3P58005 492 aa20.64■□□□□ 0.89
PCDH8-202ENST00000377942 FAM133BQ5BKY9 247 aaKnown RBP20.64■□□□□ 0.89
PCDH8-202ENST00000377942 TAF2Q6P1X5 1199 aa20.64■□□□□ 0.89
PCDH8-202ENST00000377942 TBC1D1Q86TI0 1168 aaPredicted RBP20.64■□□□□ 0.89
PCDH8-202ENST00000377942 NOP9Q86U38 636 aaKnown RBP20.64■□□□□ 0.89
PCDH8-202ENST00000377942 FAM129AQ9BZQ8 928 aa20.64■□□□□ 0.89
PCDH8-202ENST00000377942 A0A0G2JND7 137 aa20.64■□□□□ 0.89
PCDH8-202ENST00000377942 STK25O00506 426 aa20.64■□□□□ 0.89
PCDH8-202ENST00000377942 APRTP07741 180 aa20.64■□□□□ 0.89
PCDH8-202ENST00000377942 AKR1A1P14550 325 aa20.64■□□□□ 0.89
PCDH8-202ENST00000377942 SESN2P58004 480 aaPredicted RBP20.64■□□□□ 0.89
PCDH8-202ENST00000377942 NUDCD3Q8IVD9 361 aa20.64■□□□□ 0.89
PCDH8-202ENST00000377942 F5H423 210 aaPredicted RBP20.63■□□□□ 0.89
PCDH8-202ENST00000377942 GNGT2O14610 69 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 ZNF185O15231 689 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 SLITRK3O94933 977 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 VTNP04004 478 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 HARS2P49590 506 aaKnown RBP20.63■□□□□ 0.89
PCDH8-202ENST00000377942 CDKAL1Q5VV42 579 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 FAM117BQ6P1L5 589 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 REPS2Q8NFH8 660 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 DDX27Q96GQ7 796 aaKnown RBP20.63■□□□□ 0.89
PCDH8-202ENST00000377942 FRMD8P1Q9BZ68 369 aaPredicted RBP20.63■□□□□ 0.89
PCDH8-202ENST00000377942 ADAM21Q9UKJ8 722 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 TRAF3IP3Q9Y228 551 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 A0A087WZ62 844 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 ERVK-9P63128 1117 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 ERVK-24P63145 666 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 RBM15Q96T37 977 aaKnown RBP eCLIP20.63■□□□□ 0.89
PCDH8-202ENST00000377942 FDXACB1Q9BRP7 624 aaPredicted RBP20.63■□□□□ 0.89
PCDH8-202ENST00000377942 UPF3AQ9H1J1 476 aaKnown RBP20.63■□□□□ 0.89
PCDH8-202ENST00000377942 IRAK4Q9NWZ3 460 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 GTSE1Q9NYZ3 720 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 UBA6A0AVT1 1052 aaPredicted RBP20.63■□□□□ 0.89
PCDH8-202ENST00000377942 CST8O60676 142 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 F9P00740 461 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 NCAM1P13591 858 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 RIOX2Q8IUF8 465 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 CCNYL1Q8N7R7 359 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 SPATA18Q8TC71 538 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 GIPC2Q8TF65 315 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 MS4A14Q96JA4 679 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 SARS2Q9NP81 518 aaKnown RBP20.63■□□□□ 0.89
PCDH8-202ENST00000377942 THP07101 528 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 SERPINB9P50453 376 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 RAB27AP51159 221 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 MDM2Q00987 491 aaPredicted RBP20.63■□□□□ 0.89
PCDH8-202ENST00000377942 KIF19Q2TAC6 998 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 CERS5Q8N5B7 392 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 WDR18Q9BV38 432 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 STARD7Q9NQZ5 370 aa20.63■□□□□ 0.89
PCDH8-202ENST00000377942 PSTPIP1O43586 416 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 RBP3P10745 1247 aa20.62■□□□□ 0.89
PCDH8-202ENST00000377942 ADORA2AP29274 412 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms