RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 CDR2Q01850 454 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 ILF2Q12905 390 aaKnown RBP10.34□□□□□ -0.75
SCAF11-202ENST00000369367 WDR49Q8IV35 697 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 ASB7Q9H672 318 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 STK39Q9UEW8 545 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 GAKO14976 1311 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 NRCAMQ92823 1304 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 TBKBP1A7MCY6 615 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 PRR29P0C7W0 189 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 SETSIPP0DME0 302 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 MYBP10242 640 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 IRF1P10914 325 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 UCHL3P15374 230 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 CASP1P29466 404 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 GFPT1Q06210 699 aaPredicted RBP10.34□□□□□ -0.75
SCAF11-202ENST00000369367 SLC18A3Q16572 532 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 SLC27A1Q6PCB7 646 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 C17orf53Q8N3J3 647 aaPredicted RBP10.34□□□□□ -0.75
SCAF11-202ENST00000369367 ANKS1AQ92625 1134 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 UMODL1Q5DID0 1318 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 NPHP3-ACAD11A0A0J9YXS1 232 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 TXNDC9O14530 226 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 TWF1Q12792 350 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 CATSPERGQ6ZRH7 1159 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 ADGRF2Q8IZF7 708 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 FRMD8P1Q9BZ68 369 aaPredicted RBP10.34□□□□□ -0.75
SCAF11-202ENST00000369367 SYNDIG1Q9H7V2 258 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 EML4Q9HC35 981 aaKnown RBP10.34□□□□□ -0.75
SCAF11-202ENST00000369367 FAM49BQ9NUQ9 324 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 DNAJC17Q9NVM6 304 aaKnown RBP10.34□□□□□ -0.75
SCAF11-202ENST00000369367 PKP3Q9Y446 797 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 ITIH6Q6UXX5 1313 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 MGEA5O60502 916 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 ANXA9O76027 345 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.34□□□□□ -0.75
SCAF11-202ENST00000369367 PAN2Q504Q3 1202 aaKnown RBP10.34□□□□□ -0.75
SCAF11-202ENST00000369367 SYN2Q92777 582 aaPredicted RBP10.34□□□□□ -0.75
SCAF11-202ENST00000369367 CGRRF1Q99675 332 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 SH2D3AQ9BRG2 576 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 GOLPH3LQ9H4A5 285 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 AGPAT3Q9NRZ7 376 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 SENP1Q9P0U3 644 aa10.34□□□□□ -0.75
SCAF11-202ENST00000369367 SPAG6O75602 509 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 ZBTB48P10074 688 aaPredicted RBP10.33□□□□□ -0.76
SCAF11-202ENST00000369367 KLRC2P26717 231 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 TIGD7Q6NT04 549 aaPredicted RBP10.33□□□□□ -0.76
SCAF11-202ENST00000369367 CCDC149Q6ZUS6 474 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 UBXN6Q9BZV1 441 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 ZFATQ9P243 1243 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 PCDHB5Q9Y5E4 795 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 CUL2Q13617 745 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 RUBCNQ92622 972 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 ARHGEF26Q96DR7 871 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 OTUB1Q96FW1 271 aaPredicted RBP10.33□□□□□ -0.76
SCAF11-202ENST00000369367 LRRC37BQ96QE4 947 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 CINPQ9BW66 212 aaPredicted RBP10.33□□□□□ -0.76
SCAF11-202ENST00000369367 TLR8Q9NR97 1041 aaKnown RBP10.33□□□□□ -0.76
SCAF11-202ENST00000369367 TTC26A0AVF1 554 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 NFIBO00712 420 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 RTN3O95197 1032 aaPredicted RBP10.33□□□□□ -0.76
SCAF11-202ENST00000369367 PPM1AP35813 382 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 ARHGDIAP52565 204 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 C2orf54Q08AI8 447 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 PABPC1LQ4VXU2 614 aaKnown RBP10.33□□□□□ -0.76
SCAF11-202ENST00000369367 ZPBP2Q6X784 338 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 RASSF3Q86WH2 238 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.33□□□□□ -0.763e-6■■■■■ 50.8
SCAF11-202ENST00000369367 PAK5Q9P286 719 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 CTIFO43310 598 aaKnown RBP10.33□□□□□ -0.76
SCAF11-202ENST00000369367 LUC7L3O95232 432 aaKnown RBP10.33□□□□□ -0.76
SCAF11-202ENST00000369367 KIF19Q2TAC6 998 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 TTLL9Q3SXZ7 439 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 NAPEPLDQ6IQ20 393 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 GPAT2Q6NUI2 795 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 ZNF467Q7Z7K2 595 aaPredicted RBP10.33□□□□□ -0.76
SCAF11-202ENST00000369367 MKL1Q969V6 931 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 VPS11Q9H270 941 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 AIPL1Q9NZN9 384 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 INTUQ9ULD6 942 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 PLA2G4CQ9UP65 541 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 SLC9A3R1O14745 358 aaPredicted RBP10.33□□□□□ -0.76
SCAF11-202ENST00000369367 MAP3K13O43283 966 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 GPR63Q9BZJ6 419 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 WDCPQ9H6R7 721 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 ARHGAP10A1A4S6 786 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 ALDH1A2O94788 518 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 FBXW4P57775 412 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 AARS2Q5JTZ9 985 aaKnown RBP10.33□□□□□ -0.76
SCAF11-202ENST00000369367 ANGPTL8Q6UXH0 198 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 TRIM48Q8IWZ4 208 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 TTC30BQ8N4P2 665 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 RNF217Q8TC41 542 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 SPIRE2Q8WWL2 714 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 FAM129AQ9BZQ8 928 aa10.33□□□□□ -0.76
SCAF11-202ENST00000369367 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.33□□□□□ -0.76
SCAF11-202ENST00000369367 NPTX2P47972 431 aa10.32□□□□□ -0.76
SCAF11-202ENST00000369367 LAMTOR4Q0VGL1 99 aa10.32□□□□□ -0.76
SCAF11-202ENST00000369367 FBXO47Q5MNV8 452 aa10.32□□□□□ -0.76
SCAF11-202ENST00000369367 GPATCH11Q8N954 259 aa10.32□□□□□ -0.76
SCAF11-202ENST00000369367 USP38Q8NB14 1042 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms