RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 ESR2Q92731 530 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 ARHGEF4Q9NR80 690 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 ETNK2Q9NVF9 386 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 RWDD2AQ9UIY3 292 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 PLAAQ9Y263 795 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 PSAT1Q9Y617 370 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 FER1L5A0AVI2 2057 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 A6NNZ2 444 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 GRAP2O75791 330 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 TMEM63AO94886 807 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 FGGP02679 453 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 ARHGAP4P98171 946 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 CCDC15Q0P6D6 951 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 USP4Q13107 963 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 VWA3BQ502W6 1294 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 C16orf86Q6ZW13 317 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 SLC25A41Q8N5S1 370 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 SLC35G2Q8TBE7 412 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 TDRD1Q9BXT4 1180 aaKnown RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 IMPACTQ9P2X3 320 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 GNEQ9Y223 722 aaKnown RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 ALG6Q9Y672 507 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 CLUHO75153 1309 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 VWA8A3KMH1 1905 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 CSPG4Q6UVK1 2322 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 ANKHD1Q8IWZ3 2542 aaKnown RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 C9JVG2 144 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 PPP6CO00743 305 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 NRG2O14511 850 aaPredicted RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 TNNT3P45378 269 aaPredicted RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 PLTPP55058 493 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 MKRN3Q13064 507 aaKnown RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 DTHD1Q6ZMT9 781 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 ECHDC2Q86YB7 292 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 DYDC2Q96IM9 177 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 COL25A1Q9BXS0 654 aaPredicted RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 SDCBP2Q9H190 292 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 HCSTQ9UBK5 93 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 NOCTQ9UK39 431 aaKnown RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 HELZP42694 1942 aaKnown RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 FAM208BQ5VWN6 2430 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 CFBP00751 764 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 HMGCRP04035 888 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 NELFEP18615 380 aaKnown RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 VCAM1P19320 739 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 PCSK6P29122 969 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 GRM4Q14833 912 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 TMEM119Q4V9L6 283 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 MDH1BQ5I0G3 518 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 CCDC174Q6PII3 467 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 MTHFD1LQ6UB35 978 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 PTAR1Q7Z6K3 402 aaPredicted RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 EPS8L1Q8TE68 723 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 PARD3BQ8TEW8 1205 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 HNRNPLLQ8WVV9 542 aaKnown RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 LARP4BQ92615 738 aaKnown RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 CYFIP2Q96F07 1278 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 PARK7Q99497 189 aaKnown RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 TACO1Q9BSH4 297 aaKnown RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 PDLIM7Q9NR12 457 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 SLC17A7Q9P2U7 560 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 PRR12Q9ULL5 1215 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 DIS3Q9Y2L1 958 aaKnown RBP6.05□□□□□ -1.44
CD47-201ENST00000355354 ABCA2Q9BZC7 2435 aa6.05□□□□□ -1.44
CD47-201ENST00000355354 H0Y3Z8 333 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 ORC4O43929 436 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 SPAG7O75391 227 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 DRD4P21917 467 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 JAM2P57087 298 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 FMO1Q01740 532 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 GABPB1Q06547 395 aaPredicted RBP6.04□□□□□ -1.44
CD47-201ENST00000355354 TAF1CQ15572 869 aaPredicted RBP6.04□□□□□ -1.44
CD47-201ENST00000355354 TCTN1Q2MV58 587 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 FAM133BQ5BKY9 247 aaKnown RBP6.04□□□□□ -1.44
CD47-201ENST00000355354 GPR142Q7Z601 462 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 C4orf33Q8N1A6 199 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 PQLC3Q8N755 202 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 MNS1Q8NEH6 495 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 TPCN2Q8NHX9 752 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 JOSD2Q8TAC2 188 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 CD101Q93033 1021 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 NAPGQ99747 312 aaPredicted RBP6.04□□□□□ -1.44
CD47-201ENST00000355354 ANKFY1Q9P2R3 1169 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 CHKBQ9Y259 395 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 TTC24A2A3L6 582 aaPredicted RBP6.04□□□□□ -1.44
CD47-201ENST00000355354 WDR91A4D1P6 747 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 MAGEA10P43363 369 aaPredicted RBP6.04□□□□□ -1.44
CD47-201ENST00000355354 ATXN3P54252 364 aaPredicted RBP6.04□□□□□ -1.44
CD47-201ENST00000355354 VWA5B1Q5TIE3 1220 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 RHBDF2Q6PJF5 856 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 NPNTQ6UXI9 565 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 FASTKD5Q7L8L6 764 aaKnown RBP6.04□□□□□ -1.44
CD47-201ENST00000355354 MPP5Q8N3R9 675 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 IQUBQ8NA54 791 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 GDAP1Q8TB36 358 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 ABCB11O95342 1321 aa6.04□□□□□ -1.44
CD47-201ENST00000355354 PHF3Q92576 2039 aaKnown RBP6.04□□□□□ -1.44
CD47-201ENST00000355354 EIF3HO15372 352 aaKnown RBP eCLIP6.04□□□□□ -1.44
CD47-201ENST00000355354 B4GALT3O60512 393 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms