RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 PTP4A2Q12974 167 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 TRIM32Q13049 653 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 MAP9Q49MG5 647 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 CCNI2Q6ZMN8 369 aaPredicted RBP13.25□□□□□ -0.29
ZNF548-201ENST00000336128 GSPT2Q8IYD1 628 aaKnown RBP13.25□□□□□ -0.29
ZNF548-201ENST00000336128 UBE2Q2Q8WVN8 375 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 HPDLQ96IR7 371 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 VCPIP1Q96JH7 1222 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 CXCL16Q9H2A7 254 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 PLEKHA5Q9HAU0 1116 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 STIM2Q9P246 746 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 DERAQ9Y315 318 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 CCDC188H7C350 402 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 AOC2O75106 756 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 P4HA1P13674 534 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 CTNNA1P35221 906 aaKnown RBP13.25□□□□□ -0.29
ZNF548-201ENST00000336128 CRYBB1P53674 252 aaPredicted RBP13.25□□□□□ -0.29
ZNF548-201ENST00000336128 GNASQ5JWF2 1037 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 NME8Q8N427 588 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 C1orf131Q8NDD1 294 aaKnown RBP13.25□□□□□ -0.29
ZNF548-201ENST00000336128 HINFPQ9BQA5 517 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 TRIM7Q9C029 511 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 CYP3A43Q9HB55 503 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 PCDHGC3Q9UN70 934 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 L1RE1Q9UN81 338 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 PIN4Q9Y237 131 aaKnown RBP13.25□□□□□ -0.29
ZNF548-201ENST00000336128 HES2Q9Y543 173 aa13.25□□□□□ -0.29
ZNF548-201ENST00000336128 CITO14578 2027 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 STAU1O95793 577 aaKnown RBP13.24□□□□□ -0.29
ZNF548-201ENST00000336128 PGK1P00558 417 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 FGGP02679 453 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 PAEPP09466 180 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 MYBL2P10244 700 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 ITGA4P13612 1032 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 CD19P15391 556 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 PEX5P50542 639 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 YARSP54577 528 aaKnown RBP13.24□□□□□ -0.29
ZNF548-201ENST00000336128 RAD23BP54727 409 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 HDXQ7Z353 690 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 TMEM35BQ8NCS4 154 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 WHAMMQ8TF30 809 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 ELOVL4Q9GZR5 314 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 NXF3Q9H4D5 531 aaKnown RBP13.24□□□□□ -0.29
ZNF548-201ENST00000336128 TRIP12Q14669 1992 aaPredicted RBP13.24□□□□□ -0.29
ZNF548-201ENST00000336128 MAP2K7O14733 419 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 RAD51CO43502 376 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 RECQL4O94761 1208 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 HEXIM1O94992 359 aaKnown RBP13.24□□□□□ -0.29
ZNF548-201ENST00000336128 MMP8P22894 467 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 TNFRSF8P28908 595 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 CDH5P33151 784 aaPredicted RBP13.24□□□□□ -0.29
ZNF548-201ENST00000336128 PLA2G4AP47712 749 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 CAP1Q01518 475 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 NOGQ13253 232 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 UBXN11Q5T124 520 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 PLEKHA7Q6IQ23 1121 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 DENND1BQ6P3S1 775 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 CXCL17Q6UXB2 119 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 KRT222Q8N1A0 295 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 ZMAT2Q96NC0 199 aaKnown RBP13.24□□□□□ -0.29
ZNF548-201ENST00000336128 TWNKQ96RR1 684 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 APOL6Q9BWW8 343 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 TRIM6Q9C030 488 aaPredicted RBP13.24□□□□□ -0.29
ZNF548-201ENST00000336128 SPC25Q9HBM1 224 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 HMGXB4Q9UGU5 601 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 PCDHA3Q9Y5H8 950 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 SCINQ9Y6U3 715 aa13.24□□□□□ -0.29
ZNF548-201ENST00000336128 CCDC66A2RUB6 948 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 SEPT4O43236 478 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 MED7O43513 233 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 CILPO75339 1184 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 CALB1P05937 261 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 RARBP10826 455 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 CACNB2Q08289 660 aaPredicted RBP13.23□□□□□ -0.29
ZNF548-201ENST00000336128 ORC1Q13415 861 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 MAMLD1Q13495 774 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 CLUL1Q15846 466 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 NBPF20Q3BBV1 942 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 SEL1L2Q5TEA6 688 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 AADACL2Q6P093 401 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 TAF2Q6P1X5 1199 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 SLC4A11Q8NBS3 891 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 NAP1L3Q99457 506 aaPredicted RBP13.23□□□□□ -0.29
ZNF548-201ENST00000336128 ZNF518BQ9C0D4 1074 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 DDX47Q9H0S4 455 aaKnown RBP13.23□□□□□ -0.29
ZNF548-201ENST00000336128 MRPL47Q9HD33 250 aaKnown RBP13.23□□□□□ -0.29
ZNF548-201ENST00000336128 GDF3Q9NR23 364 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 CNTN3Q9P232 1028 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 TUBGCP4Q9UGJ1 667 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 CEP83Q9Y592 693 aa13.23□□□□□ -0.29
ZNF548-201ENST00000336128 MYO1FO00160 1098 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 PROSCO94903 275 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 GLI1P08151 1106 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 TNNT3P45378 269 aaPredicted RBP13.22□□□□□ -0.29
ZNF548-201ENST00000336128 NKX3-2P78367 333 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 MRPS6P82932 125 aaKnown RBP13.22□□□□□ -0.29
ZNF548-201ENST00000336128 CBX1P83916 185 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 IFT20Q8IY31 132 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 WDTC1Q8N5D0 677 aa13.22□□□□□ -0.29
ZNF548-201ENST00000336128 BEST2Q8NFU1 509 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms