RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 CPA5Q8WXQ8 436 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 SLC9A7Q96T83 725 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 POLR1BQ9H9Y6 1135 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 EIF2AK4Q9P2K8 1649 aaKnown RBP17.11■□□□□ 0.33
PTCH1-201ENST00000331920 MYO3BQ8WXR4 1341 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 PDE5AO76074 875 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 NUDT14O95848 222 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 IL6P05231 212 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 CHN1P15882 459 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 KPNA1P52294 538 aaPredicted RBP17.11■□□□□ 0.33
PTCH1-201ENST00000331920 NT5DC4Q86YG4 428 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 GATAD2AQ86YP4 633 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 SEC16BQ96JE7 1060 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 AMACRQ9UHK6 382 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 HPS5Q9UPZ3 1129 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 SIK3Q9Y2K2 1263 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 TMEM62Q0P6H9 643 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 ARID5BQ14865 1188 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 CLEC16AQ2KHT3 1053 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 DNAL1Q4LDG9 190 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 GABBR1Q9UBS5 961 aa17.11■□□□□ 0.33
PTCH1-201ENST00000331920 ZNF682O95780 498 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 S100A9P06702 114 aaKnown RBP17.1■□□□□ 0.33
PTCH1-201ENST00000331920 TTLL4Q14679 1199 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 VIPAS39Q9H9C1 493 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 LCMT1Q9UIC8 334 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 PPP2R3BQ9Y5P8 575 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 ZHX2Q9Y6X8 837 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 SPACA6W5XKT8 324 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 MFN2O95140 757 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 CCDC130P13994 396 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 SNRNP48Q6IEG0 339 aaKnown RBP17.1■□□□□ 0.33
PTCH1-201ENST00000331920 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.1■□□□□ 0.33
PTCH1-201ENST00000331920 FAM118BQ9BPY3 351 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 ATP10DQ9P241 1426 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 CPSF4O95639 269 aaKnown RBP17.1■□□□□ 0.33
PTCH1-201ENST00000331920 EIF2B5Q13144 721 aaKnown RBP17.1■□□□□ 0.33
PTCH1-201ENST00000331920 SNX30Q5VWJ9 437 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 ULK3Q6PHR2 472 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 C6orf62Q9GZU0 229 aaPredicted RBP17.1■□□□□ 0.33
PTCH1-201ENST00000331920 LOC100653049A0A140TA62 436 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 HEATR9A2RTY3 570 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 KRT34O76011 436 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 CLUP10909 449 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 MMRN1Q13201 1228 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 PHACTR1Q9C0D0 580 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 TMCC3Q9ULS5 477 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 ATP6V1B2P21281 511 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 LCORLQ8N3X6 602 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 EPC1Q9H2F5 836 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 MRPL48Q96GC5 212 aaKnown RBP17.1■□□□□ 0.33
PTCH1-201ENST00000331920 A0A1W2PQ27 194 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 A0A1W2PQ64 194 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 A0A1W2PQD8 194 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 SNTNA6NMZ2 147 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 OTUD4Q01804 1114 aaKnown RBP17.1■□□□□ 0.33
PTCH1-201ENST00000331920 MGAT5BQ3V5L5 792 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 PUS3Q9BZE2 481 aaKnown RBP17.1■□□□□ 0.33
PTCH1-201ENST00000331920 KIAA1586Q9HCI6 787 aa17.1■□□□□ 0.33
PTCH1-201ENST00000331920 MFSD14CQ5VZR4 134 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 APLFQ8IW19 511 aaPredicted RBP17.09■□□□□ 0.33
PTCH1-201ENST00000331920 RAET1EQ8TD07 263 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 MBD2Q9UBB5 411 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 GH2P01242 217 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 PRUNE1Q86TP1 453 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 SCFD2Q8WU76 684 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 RSPH1Q8WYR4 309 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 EAF2Q96CJ1 260 aaPredicted RBP17.09■□□□□ 0.33
PTCH1-201ENST00000331920 FAM129BQ96TA1 746 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 A0A1W2PP64 1363 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 SMAPO00193 183 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 ABCB1P08183 1280 aaPredicted RBP17.09■□□□□ 0.33
PTCH1-201ENST00000331920 SEMA3FQ13275 785 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 TAF13Q15543 124 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 B3GALNT2Q8NCR0 500 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 FLAD1Q8NFF5 587 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 RDM1Q8NG50 284 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 CASP10Q92851 521 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 AIFM3Q96NN9 605 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 SLC9A8Q9Y2E8 581 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 ZNF200P98182 395 aaPredicted RBP17.09■□□□□ 0.33
PTCH1-201ENST00000331920 KCNK16Q96T55 309 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 NFKBIZQ9BYH8 718 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 RNF112Q9ULX5 631 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 SAC3D1A6NKF1 404 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 CCT3P49368 545 aaKnown RBP17.09■□□□□ 0.33
PTCH1-201ENST00000331920 EIF2B2P49770 351 aaKnown RBP17.09■□□□□ 0.33
PTCH1-201ENST00000331920 NLRP10Q86W26 655 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 LRRC39Q96DD0 335 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 S100A13Q99584 98 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 PRR12Q9ULL5 1215 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 ARL2BPQ9Y2Y0 163 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 KDM5BQ9UGL1 1544 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 TFE3P19532 575 aaPredicted RBP17.09■□□□□ 0.33
PTCH1-201ENST00000331920 STAT3P40763 770 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 STKLD1Q8NE28 680 aa17.09■□□□□ 0.33
PTCH1-201ENST00000331920 RSPH9Q9H1X1 276 aaPredicted RBP17.09■□□□□ 0.33
PTCH1-201ENST00000331920 CHURC1-FNTBB4DL54 471 aa17.08■□□□□ 0.33
PTCH1-201ENST00000331920 ZNF862O60290 1169 aa17.08■□□□□ 0.33
PTCH1-201ENST00000331920 POTEIP0CG38 1075 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms