RNA–Protein interactions for RNA: ENST00000312196.8

MSL3-201, Transcript of MSL complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSL3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-201ENST00000312196 KBTBD4Q9NVX7 518 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 GDAP2Q9NXN4 497 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 TUBGCP4Q9UGJ1 667 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 USP20Q9Y2K6 914 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 NUMBLQ9Y6R0 609 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 PATJQ8NI35 1801 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 MYMKA6NI61 221 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 CCL16O15467 120 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 NARSO43776 548 aaKnown RBP9.13□□□□□ -0.95
MSL3-201ENST00000312196 EXTL3O43909 919 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 STAU1O95793 577 aaKnown RBP9.13□□□□□ -0.95
MSL3-201ENST00000312196 LILRA4P59901 499 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 LMNB2Q03252 620 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 E2F4Q16254 413 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 CYP4A22Q5TCH4 519 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 GET4Q7L5D6 327 aaPredicted RBP9.13□□□□□ -0.95
MSL3-201ENST00000312196 DPH6Q7L8W6 267 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 METTL23Q86XA0 190 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 TMEM86AQ8N2M4 240 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 C7orf25Q9BPX7 421 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 RTKNQ9BST9 563 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 ANKFY1Q9P2R3 1169 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 ITGA11Q9UKX5 1188 aa9.13□□□□□ -0.95
MSL3-201ENST00000312196 MRPS23Q9Y3D9 190 aaKnown RBP9.13□□□□□ -0.95
MSL3-201ENST00000312196 VPS37CA5D8V6 355 aaPredicted RBP9.12□□□□□ -0.95
MSL3-201ENST00000312196 MOSPD3O75425 235 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 SEC24AO95486 1093 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 SPATA31D3P0C874 917 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 TCF3P15923 654 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 FCARP24071 287 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 TAF6P49848 677 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 EPHB3P54753 998 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 MCCD1P59942 119 aaPredicted RBP9.12□□□□□ -0.95
MSL3-201ENST00000312196 GRIN1Q05586 938 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 BMT2Q1RMZ1 405 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 JADE1Q6IE81 842 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 IQCEQ6IPM2 695 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 CENPPQ6IPU0 288 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 CRELD2Q6UXH1 353 aaPredicted RBP9.12□□□□□ -0.95
MSL3-201ENST00000312196 DSTYKQ6XUX3 929 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 SPATA31D4Q6ZUB0 917 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 EPM2AIP1Q7L775 607 aaPredicted RBP9.12□□□□□ -0.95
MSL3-201ENST00000312196 DCP1BQ8IZD4 617 aaKnown RBP9.12□□□□□ -0.95
MSL3-201ENST00000312196 MAML2Q8IZL2 1156 aaPredicted RBP9.12□□□□□ -0.95
MSL3-201ENST00000312196 ZNF687Q8N1G0 1237 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 THEM5Q8N1Q8 247 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 SPPL2BQ8TCT7 592 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 HASPINQ8TF76 798 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 GOLGA2P5Q9HBQ8 144 aa9.12□□□□□ -0.95
MSL3-201ENST00000312196 PVALEFA0A1B0GWK0 134 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 ANKRD63C9JTQ0 380 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 PRRG1O14668 218 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 LAMTOR5O43504 91 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 VNN2O95498 520 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 MYL1P05976 194 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 CFHP08603 1231 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 EHHADHQ08426 723 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 ZNF268Q14587 947 aaPredicted RBP9.11□□□□□ -0.95
MSL3-201ENST00000312196 USP37Q86T82 979 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 SFR1Q86XK3 245 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 TMC8Q8IU68 726 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 TOP6BLQ8N6T0 577 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 ITFG1Q8TB96 612 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 ZNF507Q8TCN5 953 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 KCNG4Q8TDN1 519 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 RABGGTAQ92696 567 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 SMARCD2Q92925 531 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 EPSTI1Q96J88 318 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 SENP8Q96LD8 212 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 USP28Q96RU2 1077 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 C8orf33Q9H7E9 229 aaPredicted RBP9.11□□□□□ -0.95
MSL3-201ENST00000312196 POLD4Q9HCU8 107 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 CACNG4Q9UBN1 327 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 YIPF1Q9Y548 306 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 REV3LO60673 3130 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 PRPF40AO75400 957 aaKnown RBP9.11□□□□□ -0.95
MSL3-201ENST00000312196 TDGF1P13385 188 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 NMT1P30419 496 aaKnown RBP9.11□□□□□ -0.95
MSL3-201ENST00000312196 TNFSF9P41273 254 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 STAT6P42226 847 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 MATR3P43243 847 aaKnown RBP eCLIP9.11□□□□□ -0.955e-11■■□□□ 12.5
MSL3-201ENST00000312196 OSTNP61366 133 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 ZBTB41Q5SVQ8 909 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 ADALQ6DHV7 355 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 OVOS1Q6IE37 1185 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 PARM1Q6UWI2 310 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 ZNF852Q6ZMS4 543 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 PDZD4Q76G19 769 aaPredicted RBP9.11□□□□□ -0.95
MSL3-201ENST00000312196 DGLUCYQ7Z3D6 616 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 CELF5Q8N6W0 485 aaKnown RBP9.11□□□□□ -0.95
MSL3-201ENST00000312196 IQUBQ8NA54 791 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 RASSF8Q8NHQ8 419 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 PSMG2Q969U7 264 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 ASB16Q96NS5 453 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 PLIN2Q99541 437 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 CHRDQ9H2X0 955 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 CYP4F11Q9HBI6 524 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 ASAH2Q9NR71 780 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 DPP3Q9NY33 737 aa9.11□□□□□ -0.95
MSL3-201ENST00000312196 LAMA2P24043 3122 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms