RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 SUGT1Q9Y2Z0 365 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 DGKIO75912 1065 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 PIGHQ14442 188 aaPredicted RBP17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 ADRM1Q16186 407 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 IRGCQ6NXR0 463 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 MRPL1Q9BYD6 325 aaKnown RBP17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 AGAP1Q9UPQ3 857 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 ATP9AO75110 1047 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 ATP6V1B1P15313 513 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 PLA2G4FQ68DD2 849 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 TTC39CQ8N584 583 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 ZNF512BQ96KM6 892 aaPredicted RBP17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 SPATA33Q96N06 139 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 FOXP3Q9BZS1 431 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 RUBCNLQ9H714 662 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 IQGAP3Q86VI3 1631 aa17.23■□□□□ 0.35
SH3RF1-201ENST00000284637 TBX3O15119 743 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 PRKCBP05771 671 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 RBBP7Q16576 425 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 ATG4AQ8WYN0 398 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 E2F7Q96AV8 911 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 ACSF2Q96CM8 615 aaPredicted RBP17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 EML4Q9HC35 981 aaKnown RBP17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 AFF4Q9UHB7 1163 aaKnown RBP17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 DGAT1O75907 488 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 ATP4AP20648 1035 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 TOB1P50616 345 aaPredicted RBP17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 TSPY1Q01534 308 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 TROAPQ12815 778 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 USP10Q14694 798 aaKnown RBP17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 FAM81AQ8TBF8 368 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 TASP1Q9H6P5 420 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 PKD2L2Q9NZM6 624 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 HAO1Q9UJM8 370 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 KLHL2O95198 593 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 FXR2P51116 673 aaKnown RBP eCLIP17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 INPP5AQ14642 412 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 EHD4Q9H223 541 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 ACAD9Q9H845 621 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 SEPT3Q9UH03 358 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 RSPH10B2B2RC85 870 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 HNRNPCL2B2RXH8 293 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 HLA-DRAP01903 254 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 RSPH10BP0C881 870 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 CHI3L2Q15782 390 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 MROH9Q5TGP6 573 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 TAS2R42Q7RTR8 314 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 RFWD2Q8NHY2 731 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 SERPINB12Q96P63 405 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 MCM8Q9UJA3 840 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 CORO1CQ9ULV4 474 aaPredicted RBP17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 C2CD2Q9Y426 696 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 MYO3BQ8WXR4 1341 aa17.22■□□□□ 0.35
SH3RF1-201ENST00000284637 RPA1P27694 616 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 CCDC15Q0P6D6 951 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 TRIM16LQ309B1 348 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 POTEAQ6S8J7 498 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 NMD3Q96D46 503 aaKnown RBP17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 COG4Q9H9E3 785 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 PPCSQ9HAB8 311 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 RXFP1Q9HBX9 757 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 KCNQ2O43526 872 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 SERPINB9P50453 376 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 EFNA5P52803 228 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 TPI1P60174 286 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 CCDC85BQ15834 202 aaPredicted RBP17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 USP33Q8TEY7 942 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 CMTM5Q96DZ9 223 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 WDR35Q9P2L0 1181 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 PHTF1Q9UMS5 762 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 SNX9Q9Y5X1 595 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 IQCA1LA6NCM1 817 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 SYNDIG1LA6NDD5 238 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 SRRM3A6NNA2 597 aaPredicted RBP17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 XPO1O14980 1071 aaKnown RBP17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 STAT5BP51692 787 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 C6orf10Q5SRN2 563 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 ZSWIM1Q9BR11 485 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 JMJD4Q9H9V9 463 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 BTBD7Q9P203 1132 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 GTPBP10A4D1E9 387 aaKnown RBP17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 SYF2O95926 243 aaKnown RBP17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 WASHC2DQ5SRD0 308 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 FAM71DQ8N9W8 422 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 CASS4Q9NQ75 786 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 A1CFQ9NQ94 594 aaKnown RBP17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 NDFIP2Q9NV92 336 aa17.21■□□□□ 0.35
SH3RF1-201ENST00000284637 ANO4Q32M45 955 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 THEMIS2Q5TEJ8 643 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 RIBC1Q8N443 379 aaPredicted RBP17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 AFG1LQ8WV93 481 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 CYGBQ8WWM9 190 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 SLC37A4O43826 429 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 CACNB2Q08289 660 aaPredicted RBP17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 FBXO25Q8TCJ0 367 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 RMDN1Q96DB5 314 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 FAM111AQ96PZ2 611 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 MKNK1Q9BUB5 465 aa17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 C3orf70A6NLC5 250 aaPredicted RBP17.2■□□□□ 0.34
SH3RF1-201ENST00000284637 PMS1P54277 932 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms