RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 PDZD4Q76G19 769 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-222ENST00000641587 TAS1R3Q7RTX0 852 aa10.94□□□□□ -0.66
PHGDH-222ENST00000641587 GPIHBP1Q8IV16 184 aa10.94□□□□□ -0.66
PHGDH-222ENST00000641587 MAP4K3Q8IVH8 894 aa10.94□□□□□ -0.66
PHGDH-222ENST00000641587 GPR161Q8N6U8 529 aaKnown RBP10.94□□□□□ -0.66
PHGDH-222ENST00000641587 FSIP1Q8NA03 581 aa10.94□□□□□ -0.66
PHGDH-222ENST00000641587 FAM3CQ92520 227 aa10.94□□□□□ -0.66
PHGDH-222ENST00000641587 RSPRY1Q96DX4 576 aa10.94□□□□□ -0.66
PHGDH-222ENST00000641587 UROC1Q96N76 676 aa10.94□□□□□ -0.66
PHGDH-222ENST00000641587 CLIC6Q96NY7 704 aa10.94□□□□□ -0.66
PHGDH-222ENST00000641587 POLR3CQ9BUI4 534 aaPredicted RBP10.94□□□□□ -0.66
PHGDH-222ENST00000641587 TRMT61BQ9BVS5 477 aaKnown RBP10.94□□□□□ -0.66
PHGDH-222ENST00000641587 LMAN1LQ9HAT1 526 aa10.94□□□□□ -0.66
PHGDH-222ENST00000641587 RBM12Q9NTZ6 932 aaKnown RBP10.94□□□□□ -0.66
PHGDH-222ENST00000641587 CEP72Q9P209 647 aa10.94□□□□□ -0.66
PHGDH-222ENST00000641587 FBXL5Q9UKA1 691 aa10.94□□□□□ -0.66
PHGDH-222ENST00000641587 SRPRBQ9Y5M8 271 aaKnown RBP10.94□□□□□ -0.66
PHGDH-222ENST00000641587 PIAS3Q9Y6X2 628 aa10.94□□□□□ -0.66
PHGDH-222ENST00000641587 PRR5-ARHGAP8B1AHC4 643 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 TRAPPC3O43617 180 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 GDF9O60383 454 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 MYL4P12829 197 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 CCNE1P24864 410 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 RPA1P27694 616 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 GRM5P41594 1212 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 SOX9P48436 509 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 ARHGAP8P85298 464 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 GRIN1Q05586 938 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 TWF1Q12792 350 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 MRPL58Q14197 206 aaKnown RBP10.93□□□□□ -0.66
PHGDH-222ENST00000641587 PPP2R5AQ15172 486 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 TEAD2Q15562 447 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 SEZ6Q53EL9 994 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 XKR4Q5GH76 650 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 ADALQ6DHV7 355 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 ALKAL1Q6UXT8 129 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 Q6ZS52 159 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 RTL10Q7L3V2 364 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 TCEAL8Q8IYN2 117 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 C4orf32Q8N8J7 132 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 RASSF8Q8NHQ8 419 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 BORCS6Q96GS4 357 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 IFT74Q96LB3 600 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 ACO2Q99798 780 aaKnown RBP10.93□□□□□ -0.66
PHGDH-222ENST00000641587 RTKNQ9BST9 563 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 RAB34Q9BZG1 259 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 BHMT2Q9H2M3 363 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 C2orf42Q9NWW7 574 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 FAM13BQ9NYF5 915 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 TNFSF13BQ9Y275 285 aa10.93□□□□□ -0.66
PHGDH-222ENST00000641587 MORC2Q9Y6X9 1032 aaPredicted RBP10.93□□□□□ -0.66
PHGDH-222ENST00000641587 SDK1Q7Z5N4 2213 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 PHLPP2Q6ZVD8 1323 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 KIF26AQ9ULI4 1882 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-222ENST00000641587 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-222ENST00000641587 SLC38A8A6NNN8 435 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 CCDC169A6NNP5 214 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 HEPACAM2A8MVW5 462 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 CHURC1-FNTBB4DL54 471 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 ARNTLO00327 626 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 MAN2B1O00754 1011 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 ABLIM1O14639 778 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 SYN3O14994 580 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 VNN2O95498 520 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 MBD3O95983 291 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 ADRB1P08588 477 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 OR4Q2P0C623 313 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 CHRNB1P11230 501 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 PSMC3P17980 439 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 SDHBP21912 280 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 KCNA4P22459 653 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 LONP1P36776 959 aaKnown RBP10.92□□□□□ -0.66
PHGDH-222ENST00000641587 TXLNAP40222 546 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 FNTBP49356 437 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 EFNA5P52803 228 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 YARSP54577 528 aaKnown RBP10.92□□□□□ -0.66
PHGDH-222ENST00000641587 PEX3P56589 373 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 CTXN3Q4LDR2 81 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 PPM1JQ5JR12 505 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 STXBP5Q5T5C0 1151 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 HEATR6Q6AI08 1181 aaKnown RBP10.92□□□□□ -0.66
PHGDH-222ENST00000641587 LAIR1Q6GTX8 287 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 RNF19BQ6ZMZ0 732 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 DAW1Q8N136 415 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 TTC8Q8TAM2 541 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 SHKBP1Q8TBC3 707 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 ZSCAN18Q8TBC5 510 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-222ENST00000641587 SMARCD2Q92925 531 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 IRF7Q92985 503 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 ZBTB45Q96K62 511 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-222ENST00000641587 CCDC94Q9BW85 323 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-222ENST00000641587 TARS2Q9BW92 718 aaKnown RBP10.92□□□□□ -0.66
PHGDH-222ENST00000641587 FAM126AQ9BYI3 521 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-222ENST00000641587 CRISPLD1Q9H336 500 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 PTPRHQ9HD43 1115 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 TUBGCP4Q9UGJ1 667 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 RAB23Q9ULC3 237 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 NUB1Q9Y5A7 615 aa10.92□□□□□ -0.66
PHGDH-222ENST00000641587 A0A1B0GVL5 298 aa10.91□□□□□ -0.66
PHGDH-222ENST00000641587 A0A1W2PQ27 194 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms