RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 ZC3H14Q6PJT7 736 aaKnown RBP18.17■□□□□ 0.5
PHGDH-213ENST00000641272 DSTYKQ6XUX3 929 aa18.17■□□□□ 0.5
PHGDH-213ENST00000641272 ELSPBP1Q96BH3 223 aa18.17■□□□□ 0.5
PHGDH-213ENST00000641272 ZSWIM3Q96MP5 696 aa18.17■□□□□ 0.5
PHGDH-213ENST00000641272 ASB16Q96NS5 453 aa18.17■□□□□ 0.5
PHGDH-213ENST00000641272 MSTO1Q9BUK6 570 aa18.17■□□□□ 0.5
PHGDH-213ENST00000641272 CRISPLD1Q9H336 500 aa18.17■□□□□ 0.5
PHGDH-213ENST00000641272 SLITRK6Q9H5Y7 841 aa18.17■□□□□ 0.5
PHGDH-213ENST00000641272 BRD9Q9H8M2 597 aa18.17■□□□□ 0.5
PHGDH-213ENST00000641272 RPF1Q9H9Y2 349 aaKnown RBP18.17■□□□□ 0.5
PHGDH-213ENST00000641272 ASAH2Q9NR71 780 aa18.17■□□□□ 0.5
PHGDH-213ENST00000641272 TBX20Q9UMR3 447 aa18.17■□□□□ 0.5
PHGDH-213ENST00000641272 NDRG2Q9UN36 371 aaKnown RBP18.17■□□□□ 0.5
PHGDH-213ENST00000641272 M0QZQ0 153 aa18.16■□□□□ 0.5
PHGDH-213ENST00000641272 OGTO15294 1046 aa18.16■□□□□ 0.5
PHGDH-213ENST00000641272 MOSPD3O75425 235 aa18.16■□□□□ 0.5
PHGDH-213ENST00000641272 SOAT2O75908 522 aa18.16■□□□□ 0.5
PHGDH-213ENST00000641272 CENPBP07199 599 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-213ENST00000641272 NFICP08651 508 aa18.16■□□□□ 0.5
PHGDH-213ENST00000641272 NMT1P30419 496 aaKnown RBP18.16■□□□□ 0.5
PHGDH-213ENST00000641272 LRPAP1P30533 357 aa18.16■□□□□ 0.5
PHGDH-213ENST00000641272 VIPR2P41587 438 aa18.16■□□□□ 0.5
PHGDH-213ENST00000641272 CSTF1Q05048 431 aaKnown RBP18.16■□□□□ 0.5
PHGDH-213ENST00000641272 CYP4A22Q5TCH4 519 aa18.16■□□□□ 0.5
PHGDH-213ENST00000641272 JADE1Q6IE81 842 aa18.16■□□□□ 0.5
PHGDH-213ENST00000641272 VITQ6UXI7 678 aa18.16■□□□□ 0.5
PHGDH-213ENST00000641272 KIAA2013Q8IYS2 634 aa18.16■□□□□ 0.5
PHGDH-213ENST00000641272 TTC9BQ8N6N2 239 aa18.16■□□□□ 0.5
PHGDH-213ENST00000641272 RAD54LQ92698 747 aa18.16■□□□□ 0.5
PHGDH-213ENST00000641272 AK8Q96MA6 479 aa18.16■□□□□ 0.5
PHGDH-213ENST00000641272 ZNF512Q96ME7 567 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-213ENST00000641272 TMEM209Q96SK2 561 aa18.16■□□□□ 0.5
PHGDH-213ENST00000641272 PLEKHA5Q9HAU0 1116 aa18.16■□□□□ 0.5
PHGDH-213ENST00000641272 PARVGQ9HBI0 331 aa18.16■□□□□ 0.5
PHGDH-213ENST00000641272 ZFP14Q9HCL3 533 aa18.16■□□□□ 0.5
PHGDH-213ENST00000641272 SCN1AP35498 2009 aa18.15■□□□□ 0.5
PHGDH-213ENST00000641272 VPS37CA5D8V6 355 aaPredicted RBP18.15■□□□□ 0.5
PHGDH-213ENST00000641272 ZNF197O14709 1029 aa18.15■□□□□ 0.5
PHGDH-213ENST00000641272 ID4P47928 161 aa18.15■□□□□ 0.5
PHGDH-213ENST00000641272 LARP1BQ659C4 914 aaKnown RBP18.15■□□□□ 0.5
PHGDH-213ENST00000641272 TSSK4Q6SA08 328 aa18.15■□□□□ 0.5
PHGDH-213ENST00000641272 USP37Q86T82 979 aa18.15■□□□□ 0.5
PHGDH-213ENST00000641272 DCLK2Q8N568 766 aa18.15■□□□□ 0.5
PHGDH-213ENST00000641272 SHKBP1Q8TBC3 707 aa18.15■□□□□ 0.5
PHGDH-213ENST00000641272 ZSCAN18Q8TBC5 510 aaPredicted RBP18.15■□□□□ 0.5
PHGDH-213ENST00000641272 IKZF4Q9H2S9 585 aa18.15■□□□□ 0.5
PHGDH-213ENST00000641272 UPF2Q9HAU5 1272 aaKnown RBP18.15■□□□□ 0.5
PHGDH-213ENST00000641272 KCNG1Q9UIX4 513 aa18.15■□□□□ 0.5
PHGDH-213ENST00000641272 EP300Q09472 2414 aaPredicted RBP18.15■□□□□ 0.5
PHGDH-213ENST00000641272 NUP210Q8TEM1 1887 aaPredicted RBP18.14■□□□□ 0.49
PHGDH-213ENST00000641272 SHISA7A6NL88 538 aa18.14■□□□□ 0.49
PHGDH-213ENST00000641272 TRAK2O60296 914 aa18.14■□□□□ 0.49
PHGDH-213ENST00000641272 PIGRP01833 764 aa18.14■□□□□ 0.49
PHGDH-213ENST00000641272 GDI1P31150 447 aa18.14■□□□□ 0.49
PHGDH-213ENST00000641272 AARSP49588 968 aaKnown RBP eCLIP18.14■□□□□ 0.49
PHGDH-213ENST00000641272 ZNF131P52739 623 aa18.14■□□□□ 0.49
PHGDH-213ENST00000641272 DUSP4Q13115 394 aa18.14■□□□□ 0.49
PHGDH-213ENST00000641272 SF3A1Q15459 793 aaKnown RBP18.14■□□□□ 0.49
PHGDH-213ENST00000641272 ZBTB6Q15916 424 aa18.14■□□□□ 0.49
PHGDH-213ENST00000641272 ZC2HC1CQ53FD0 456 aaPredicted RBP18.14■□□□□ 0.49
PHGDH-213ENST00000641272 STXBP5Q5T5C0 1151 aa18.14■□□□□ 0.49
PHGDH-213ENST00000641272 OVOS1Q6IE37 1185 aa18.14■□□□□ 0.49
PHGDH-213ENST00000641272 ZNF852Q6ZMS4 543 aa18.14■□□□□ 0.49
PHGDH-213ENST00000641272 GPIHBP1Q8IV16 184 aa18.14■□□□□ 0.49
PHGDH-213ENST00000641272 KCTD17Q8N5Z5 321 aa18.14■□□□□ 0.49
PHGDH-213ENST00000641272 DNASE1L2Q92874 299 aa18.14■□□□□ 0.49
PHGDH-213ENST00000641272 SMARCD2Q92925 531 aa18.14■□□□□ 0.49
PHGDH-213ENST00000641272 TRMT61BQ9BVS5 477 aaKnown RBP18.14■□□□□ 0.49
PHGDH-213ENST00000641272 DNAJC25Q9H1X3 360 aa18.14■□□□□ 0.49
PHGDH-213ENST00000641272 SLC27A5Q9Y2P5 690 aa18.14■□□□□ 0.49
PHGDH-213ENST00000641272 A0A0B4J269 797 aa18.13■□□□□ 0.49
PHGDH-213ENST00000641272 A0A1W2PRU2 124 aa18.13■□□□□ 0.49
PHGDH-213ENST00000641272 MTMR11A4FU01 709 aa18.13■□□□□ 0.49
PHGDH-213ENST00000641272 ANKRD63C9JTQ0 380 aa18.13■□□□□ 0.49
PHGDH-213ENST00000641272 TULP1O00294 542 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-213ENST00000641272 SPTLC1O15269 473 aa18.13■□□□□ 0.49
PHGDH-213ENST00000641272 XPOTO43592 962 aaKnown RBP18.13■□□□□ 0.49
PHGDH-213ENST00000641272 KINO60870 393 aaKnown RBP18.13■□□□□ 0.49
PHGDH-213ENST00000641272 CYP3A5P20815 502 aa18.13■□□□□ 0.49
PHGDH-213ENST00000641272 ACOT2P49753 483 aa18.13■□□□□ 0.49
PHGDH-213ENST00000641272 USP49Q70CQ1 688 aa18.13■□□□□ 0.49
PHGDH-213ENST00000641272 TMC8Q8IU68 726 aa18.13■□□□□ 0.49
PHGDH-213ENST00000641272 MAP4K3Q8IVH8 894 aa18.13■□□□□ 0.49
PHGDH-213ENST00000641272 BEST2Q8NFU1 509 aa18.13■□□□□ 0.49
PHGDH-213ENST00000641272 LARP4BQ92615 738 aaKnown RBP18.13■□□□□ 0.49
PHGDH-213ENST00000641272 FIZ1Q96SL8 496 aa18.13■□□□□ 0.49
PHGDH-213ENST00000641272 OSBPL6Q9BZF3 934 aa18.13■□□□□ 0.49
PHGDH-213ENST00000641272 SEMA4AQ9H3S1 761 aa18.13■□□□□ 0.49
PHGDH-213ENST00000641272 CPSF3Q9UKF6 684 aaKnown RBP18.13■□□□□ 0.49
PHGDH-213ENST00000641272 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-213ENST00000641272 OTOGLQ3ZCN5 2332 aa18.13■□□□□ 0.49
PHGDH-213ENST00000641272 OAZ2O95190 189 aa18.12■□□□□ 0.49
PHGDH-213ENST00000641272 ODC1P11926 461 aa18.12■□□□□ 0.49
PHGDH-213ENST00000641272 LONP1P36776 959 aaKnown RBP18.12■□□□□ 0.49
PHGDH-213ENST00000641272 EPHA5P54756 1037 aa18.12■□□□□ 0.49
PHGDH-213ENST00000641272 TMEM132DQ14C87 1099 aa18.12■□□□□ 0.49
PHGDH-213ENST00000641272 SPATA1Q5VX52 437 aa18.12■□□□□ 0.49
PHGDH-213ENST00000641272 SFR1Q86XK3 245 aa18.12■□□□□ 0.49
PHGDH-213ENST00000641272 ATAD1Q8NBU5 361 aa18.12■□□□□ 0.49
PHGDH-213ENST00000641272 OR10T2Q8NGX3 314 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 364.4 ms