RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 BEX3Q00994 111 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 ITKQ08881 620 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 CTTNQ14247 550 aaKnown RBP12.41□□□□□ -0.42
LINC00538-201ENST00000626109 FIGNQ5HY92 759 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 GNASQ5JWF2 1037 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 CCDC122Q5T0U0 273 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 C6orf118Q5T5N4 469 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 LHX8Q68G74 356 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 IGF2-ASQ6U949 168 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 SV2BQ7L1I2 683 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 CATSPER3Q86XQ3 398 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 NKAPQ8N5F7 415 aaKnown RBP12.41□□□□□ -0.42
LINC00538-201ENST00000626109 POF1BQ8WVV4 589 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 GLG1Q92896 1179 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 DEFB118Q96PH6 123 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 CHP1Q99653 195 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 HSD17B14Q9BPX1 270 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 NOC4LQ9BVI4 516 aaKnown RBP12.41□□□□□ -0.42
LINC00538-201ENST00000626109 RHOBTB2Q9BYZ6 727 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 TRIM9Q9C026 710 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 SMARCAD1Q9H4L7 1026 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.41□□□□□ -0.42
LINC00538-201ENST00000626109 STK17AQ9UEE5 414 aa12.41□□□□□ -0.42
LINC00538-201ENST00000626109 IGSF9BQ9UPX0 1349 aa12.4□□□□□ -0.42
LINC00538-201ENST00000626109 PVALEFA0A1B0GWK0 134 aa12.4□□□□□ -0.42
LINC00538-201ENST00000626109 POTEB3A0JP26 581 aa12.4□□□□□ -0.42
LINC00538-201ENST00000626109 MYADML2A6NDP7 307 aa12.4□□□□□ -0.42
LINC00538-201ENST00000626109 RNF225M0QZC1 329 aaPredicted RBP12.4□□□□□ -0.42
LINC00538-201ENST00000626109 MUSKO15146 869 aa12.4□□□□□ -0.42
LINC00538-201ENST00000626109 KPNA6O60684 536 aa12.4□□□□□ -0.42
LINC00538-201ENST00000626109 CST5P28325 142 aaPredicted RBP12.4□□□□□ -0.42
LINC00538-201ENST00000626109 STAT5BP51692 787 aa12.4□□□□□ -0.42
LINC00538-201ENST00000626109 BEND6Q5SZJ8 279 aaPredicted RBP12.4□□□□□ -0.42
LINC00538-201ENST00000626109 POTEBQ6S5H4 581 aa12.4□□□□□ -0.42
LINC00538-201ENST00000626109 LSMEM1Q8N8F7 131 aa12.4□□□□□ -0.42
LINC00538-201ENST00000626109 PCSK9Q8NBP7 692 aaKnown RBP12.4□□□□□ -0.42
LINC00538-201ENST00000626109 ARRDC4Q8NCT1 418 aa12.4□□□□□ -0.42
LINC00538-201ENST00000626109 TRIM11Q96F44 468 aa12.4□□□□□ -0.42
LINC00538-201ENST00000626109 PLIN2Q99541 437 aa12.4□□□□□ -0.42
LINC00538-201ENST00000626109 CAAP1Q9H8G2 361 aa12.4□□□□□ -0.42
LINC00538-201ENST00000626109 SAR1BQ9Y6B6 198 aa12.4□□□□□ -0.42
LINC00538-201ENST00000626109 EIF3CLB5ME19 914 aaKnown RBP12.39□□□□□ -0.43
LINC00538-201ENST00000626109 PLOD3O60568 738 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 USO1O60763 962 aaKnown RBP12.39□□□□□ -0.43
LINC00538-201ENST00000626109 SLITRK3O94933 977 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 ZNF286BP0CG31 522 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 SPATA31C1P0DKV0 1188 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 SLC26A2P50443 739 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 PMS1P54277 932 aaKnown RBP12.39□□□□□ -0.43
LINC00538-201ENST00000626109 IRX5P78411 483 aaPredicted RBP12.39□□□□□ -0.43
LINC00538-201ENST00000626109 AMPD2Q01433 879 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 IFRD2Q12894 506 aaPredicted RBP12.39□□□□□ -0.43
LINC00538-201ENST00000626109 PRKG2Q13237 762 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 SPA17Q15506 151 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 UGCGQ16739 394 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 TM4SF20Q53R12 229 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 WDR93Q6P2C0 686 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 POTEGQ6S5H5 508 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 SPOCD1Q6ZMY3 1216 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 PLPPR4Q7Z2D5 763 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 TRAPPC11Q7Z392 1133 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 TRIM50Q86XT4 487 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 KLHDC9Q8NEP7 349 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 CNOT6LQ96LI5 555 aaKnown RBP12.39□□□□□ -0.43
LINC00538-201ENST00000626109 ERGIC2Q96RQ1 377 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 PCYT2Q99447 389 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 EIF3CQ99613 913 aaKnown RBP12.39□□□□□ -0.43
LINC00538-201ENST00000626109 BARD1Q99728 777 aaKnown RBP12.39□□□□□ -0.43
LINC00538-201ENST00000626109 PSD3Q9NYI0 1048 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 RRN3Q9NYV6 651 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 ERAP1Q9NZ08 941 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 GIMAP2Q9UG22 337 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 KIAA1024Q9UPX6 916 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 A0A0U1RQJ8 604 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 ANO9A1A5B4 782 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 LYPLA2O95372 231 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 PRKCEQ02156 737 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 GRB10Q13322 594 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 TMEM119Q4V9L6 283 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 ANKRD40Q6AI12 368 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 C4orf19Q8IY42 314 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 ZNF454Q8N9F8 522 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 EXOC4Q96A65 974 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 ANAPC16Q96DE5 110 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 KIF12Q96FN5 646 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 FAM167AQ96KS9 214 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 PNMA5Q96PV4 448 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 KATNAL1Q9BW62 490 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 PHTF1Q9UMS5 762 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 L1RE1Q9UN81 338 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 EFR3BQ9Y2G0 817 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 MSRB2Q9Y3D2 182 aa12.39□□□□□ -0.43
LINC00538-201ENST00000626109 ZBBXA8MT70 800 aa12.38□□□□□ -0.43
LINC00538-201ENST00000626109 C9IYK1 514 aa12.38□□□□□ -0.43
LINC00538-201ENST00000626109 KBTBD13C9JR72 458 aa12.38□□□□□ -0.43
LINC00538-201ENST00000626109 GJB1P08034 283 aa12.38□□□□□ -0.43
LINC00538-201ENST00000626109 RHOXF2BP0C7M4 288 aa12.38□□□□□ -0.43
LINC00538-201ENST00000626109 MARK3P27448 753 aa12.38□□□□□ -0.43
LINC00538-201ENST00000626109 HOXD12P35452 270 aa12.38□□□□□ -0.43
LINC00538-201ENST00000626109 KIF5AQ12840 1032 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms