RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 METTL5Q9NRN9 209 aaKnown RBP15.39■□□□□ 0.05
VPS36-207ENST00000611132 RBAKQ9NYW8 714 aaPredicted RBP15.39■□□□□ 0.05
VPS36-207ENST00000611132 FIS1Q9Y3D6 152 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 PCDHA3Q9Y5H8 950 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 SYNJ2BP-COX16A0A087WUM0 186 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 CCND2P30279 289 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 RNF43Q68DV7 783 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 SESTD1Q86VW0 696 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 HEXIM2Q96MH2 286 aaKnown RBP15.39■□□□□ 0.05
VPS36-207ENST00000611132 NDUFA13Q9P0J0 144 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 COX16Q9P0S2 106 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 ZC3H7BQ9UGR2 993 aaKnown RBP15.39■□□□□ 0.05
VPS36-207ENST00000611132 MGRN1O60291 552 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 OSTNP61366 133 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 FAM160B1Q5W0V3 765 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 SCUBE1Q8IWY4 988 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 FAM149B1Q96BN6 582 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 TRPV6Q9H1D0 765 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 CTNNAL1Q9UBT7 734 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 AGO2Q9UKV8 859 aaKnown RBP15.39■□□□□ 0.05
VPS36-207ENST00000611132 AFF2P51816 1311 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 DCDC2CA8MYV0 355 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 MYL2P10916 166 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 RFC5P40937 340 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 CDH6P55285 790 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 CYLC2Q14093 348 aaPredicted RBP15.39■□□□□ 0.05
VPS36-207ENST00000611132 PIGHQ14442 188 aaPredicted RBP15.39■□□□□ 0.05
VPS36-207ENST00000611132 ZNF720Q7Z2F6 126 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 PRELID2Q8N945 189 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 FEZF2Q8TBJ5 459 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 NEUROG2Q9H2A3 272 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 DNAJC18Q9H819 358 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 LRRC4BQ9NT99 713 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 ZNF711Q9Y462 761 aa15.39■□□□□ 0.05
VPS36-207ENST00000611132 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.38■□□□□ 0.05
VPS36-207ENST00000611132 HSPA8P11142 646 aaKnown RBP15.38■□□□□ 0.05
VPS36-207ENST00000611132 KRT3P12035 628 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 OSBPP22059 807 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 TYK2P29597 1187 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 SNRPFP62306 86 aaKnown RBP15.38■□□□□ 0.05
VPS36-207ENST00000611132 ZNF699Q32M78 642 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 JADE1Q6IE81 842 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 AADACL2Q6P093 401 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 IZUMO2Q6UXV1 221 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 PRPF31Q8WWY3 499 aaKnown RBP15.38■□□□□ 0.05
VPS36-207ENST00000611132 SDCCAG3Q96C92 435 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 MCEEQ96PE7 176 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 IL1RAPL1Q9NZN1 696 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 AHCYL1O43865 530 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 DNAJC6O75061 913 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 EEF1B2P24534 225 aaKnown RBP15.38■□□□□ 0.05
VPS36-207ENST00000611132 ZBTB17Q13105 803 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 RMDN3Q96TC7 470 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 BTBD10Q9BSF8 475 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 PFDN4Q9NQP4 134 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 RAB6BQ9NRW1 208 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 C21orf2O43822 256 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 ADCY3O60266 1144 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 SYCP2LQ5T4T6 812 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 PCNX4Q63HM2 1172 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 OLFML2BQ68BL8 750 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 SLC38A10Q9HBR0 1119 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 SAR1AQ9NR31 198 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 MAGED2Q9UNF1 606 aaPredicted RBP15.38■□□□□ 0.05
VPS36-207ENST00000611132 NID2Q14112 1375 aa15.38■□□□□ 0.05
VPS36-207ENST00000611132 CST8O60676 142 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 MCF2P10911 925 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 RRM1P23921 792 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 PEX5P50542 639 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 MORF4L2Q15014 288 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 CYTH1Q15438 398 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 KCTD19Q17RG1 926 aaPredicted RBP15.37■□□□□ 0.05
VPS36-207ENST00000611132 GRAMD4Q6IC98 578 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 RASGEF1CQ8N431 466 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 SCG3Q8WXD2 468 aaKnown RBP15.37■□□□□ 0.05
VPS36-207ENST00000611132 CMTM5Q96DZ9 223 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 PI4K2AQ9BTU6 479 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 DCLK3Q9C098 648 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 PCMTD2Q9NV79 361 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 SUGT1Q9Y2Z0 365 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 APOEP02649 317 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 KPNA2P52292 529 aaKnown RBP15.37■□□□□ 0.05
VPS36-207ENST00000611132 TBCCQ15814 346 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 LRRC74BQ6ZQY2 392 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 SLC47A2Q86VL8 602 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 TMEM120AQ9BXJ8 343 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 GCOM2Q9BZD3 368 aaPredicted RBP15.37■□□□□ 0.05
VPS36-207ENST00000611132 MRPL40Q9NQ50 206 aaKnown RBP15.37■□□□□ 0.05
VPS36-207ENST00000611132 ETAA1Q9NY74 926 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 STARD13Q9Y3M8 1113 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 XRN1Q8IZH2 1706 aaKnown RBP15.37■□□□□ 0.05
VPS36-207ENST00000611132 PEAK1Q9H792 1746 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 TRIM49D1C9J1S8 452 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 PIK3CDO00329 1044 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 RBP3P10745 1247 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 TFDP1Q14186 410 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 RASA2Q15283 850 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 CHI3L2Q15782 390 aa15.37■□□□□ 0.05
VPS36-207ENST00000611132 TRMT5Q32P41 509 aaKnown RBP15.37■□□□□ 0.05
VPS36-207ENST00000611132 EAPPQ56P03 285 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms