RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 ARHGEF37A1IGU5 675 aa20.23■□□□□ 0.83
PKD1-223ENST00000561668 ADAM12O43184 909 aa20.23■□□□□ 0.83
PKD1-223ENST00000561668 EXTL3O43909 919 aa20.23■□□□□ 0.83
PKD1-223ENST00000561668 GPR37L1O60883 481 aa20.23■□□□□ 0.83
PKD1-223ENST00000561668 NFICP08651 508 aa20.23■□□□□ 0.83
PKD1-223ENST00000561668 HNRNPA1P09651 372 aaKnown RBP eCLIP20.23■□□□□ 0.83
PKD1-223ENST00000561668 PLXNA3P51805 1871 aa20.23■□□□□ 0.83
PKD1-223ENST00000561668 PDCD11Q14690 1871 aaKnown RBP20.23■□□□□ 0.83
PKD1-223ENST00000561668 COBLL1Q53SF7 1204 aa20.23■□□□□ 0.83
PKD1-223ENST00000561668 ZNF280DQ6N043 979 aa20.23■□□□□ 0.83
PKD1-223ENST00000561668 ZNF461Q8TAF7 563 aa20.23■□□□□ 0.83
PKD1-223ENST00000561668 OXCT2Q9BYC2 517 aaPredicted RBP20.23■□□□□ 0.83
PKD1-223ENST00000561668 FBXW11Q9UKB1 542 aa20.23■□□□□ 0.83
PKD1-223ENST00000561668 C2CD4DB7Z1M9 353 aa20.22■□□□□ 0.83
PKD1-223ENST00000561668 XYLBO75191 536 aa20.22■□□□□ 0.83
PKD1-223ENST00000561668 PRPF40AO75400 957 aaKnown RBP20.22■□□□□ 0.83
PKD1-223ENST00000561668 C8AP07357 584 aa20.22■□□□□ 0.83
PKD1-223ENST00000561668 GUCY2FP51841 1108 aa20.22■□□□□ 0.83
PKD1-223ENST00000561668 YWHAHQ04917 246 aaPredicted RBP20.22■□□□□ 0.83
PKD1-223ENST00000561668 PNOCQ13519 176 aa20.22■□□□□ 0.83
PKD1-223ENST00000561668 C9orf57Q5W0N0 161 aa20.22■□□□□ 0.83
PKD1-223ENST00000561668 GPD1LQ8N335 351 aa20.22■□□□□ 0.83
PKD1-223ENST00000561668 EDAQ92838 391 aa20.22■□□□□ 0.83
PKD1-223ENST00000561668 CCDC47Q96A33 483 aaKnown RBP20.22■□□□□ 0.83
PKD1-223ENST00000561668 CBWD1Q9BRT8 395 aa20.22■□□□□ 0.83
PKD1-223ENST00000561668 KCTD10Q9H3F6 313 aa20.22■□□□□ 0.83
PKD1-223ENST00000561668 KIAA1586Q9HCI6 787 aa20.22■□□□□ 0.83
PKD1-223ENST00000561668 WDR6Q9NNW5 1121 aaKnown RBP20.22■□□□□ 0.83
PKD1-223ENST00000561668 AGPAT3Q9NRZ7 376 aa20.22■□□□□ 0.83
PKD1-223ENST00000561668 LMBRD1Q9NUN5 540 aa20.22■□□□□ 0.83
PKD1-223ENST00000561668 RBAKQ9NYW8 714 aaPredicted RBP20.22■□□□□ 0.83
PKD1-223ENST00000561668 POLIQ9UNA4 740 aa20.22■□□□□ 0.83
PKD1-223ENST00000561668 R3HCC1Q9Y3T6 440 aaKnown RBP20.22■□□□□ 0.83
PKD1-223ENST00000561668 PCDHA5Q9Y5H7 936 aa20.22■□□□□ 0.83
PKD1-223ENST00000561668 C5orf42Q9H799 3197 aa20.22■□□□□ 0.83
PKD1-223ENST00000561668 MTCL1Q9Y4B5 1905 aaKnown RBP20.21■□□□□ 0.83
PKD1-223ENST00000561668 GOLGA8IPA6NC78 632 aa20.21■□□□□ 0.83
PKD1-223ENST00000561668 ZNF233A6NK53 670 aa20.21■□□□□ 0.83
PKD1-223ENST00000561668 GOLGA8JA6NMD2 632 aa20.21■□□□□ 0.83
PKD1-223ENST00000561668 M0QZQ0 153 aa20.21■□□□□ 0.83
PKD1-223ENST00000561668 PRRG1O14668 218 aa20.21■□□□□ 0.83
PKD1-223ENST00000561668 KINO60870 393 aaKnown RBP20.21■□□□□ 0.83
PKD1-223ENST00000561668 GBP2P32456 591 aaPredicted RBP20.21■□□□□ 0.83
PKD1-223ENST00000561668 LILRA4P59901 499 aa20.21■□□□□ 0.83
PKD1-223ENST00000561668 TFAMQ00059 246 aaKnown RBP20.21■□□□□ 0.83
PKD1-223ENST00000561668 MRPL58Q14197 206 aaKnown RBP20.21■□□□□ 0.83
PKD1-223ENST00000561668 SLC8B1Q6J4K2 584 aa20.21■□□□□ 0.83
PKD1-223ENST00000561668 RSPO2Q6UXX9 243 aaPredicted RBP20.21■□□□□ 0.83
PKD1-223ENST00000561668 ZDHHC14Q8IZN3 488 aa20.21■□□□□ 0.83
PKD1-223ENST00000561668 GUF1Q8N442 669 aaKnown RBP20.21■□□□□ 0.83
PKD1-223ENST00000561668 SLC7A14Q8TBB6 771 aa20.21■□□□□ 0.83
PKD1-223ENST00000561668 GTPBP4Q9BZE4 634 aaKnown RBP20.21■□□□□ 0.83
PKD1-223ENST00000561668 LIMD1Q9UGP4 676 aa20.21■□□□□ 0.83
PKD1-223ENST00000561668 HOOK1Q9UJC3 728 aaKnown RBP20.21■□□□□ 0.83
PKD1-223ENST00000561668 FBXL5Q9UKA1 691 aa20.21■□□□□ 0.83
PKD1-223ENST00000561668 MUC3AQ02505 3323 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 FAM86C2PA6NEL3 165 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 PIRO00625 290 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 PDXKO00764 312 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 ODC1P11926 461 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 HOXA9P31269 272 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 SURF1Q15526 300 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 NFIL3Q16649 462 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 TPGS2Q68CL5 300 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 HS2ST1Q7LGA3 356 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 SLC9A9Q8IVB4 645 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 BRSK2Q8IWQ3 736 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 ZSWIM2Q8NEG5 633 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 GOLGA5Q8TBA6 731 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 ZNF707Q96C28 371 aaPredicted RBP20.2■□□□□ 0.82
PKD1-223ENST00000561668 LRFN3Q9BTN0 628 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 DMAC2Q9NW81 257 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 RMND1Q9NWS8 449 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.2■□□□□ 0.82
PKD1-223ENST00000561668 TIMM13Q9Y5L4 95 aaPredicted RBP20.2■□□□□ 0.82
PKD1-223ENST00000561668 CLUHO75153 1309 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 ANK1P16157 1881 aa20.2■□□□□ 0.82
PKD1-223ENST00000561668 VWA8A3KMH1 1905 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 ABLIM3O94929 683 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 OAZ2O95190 189 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 SMC2O95347 1197 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 LRG1P02750 347 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 CPB1P15086 417 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 ATF2P15336 505 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 TAF6P49848 677 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 ZXDAP98168 799 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 ROR1Q01973 937 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 MYBPC2Q14324 1141 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 PTPN21Q16825 1174 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 METTL23Q86XA0 190 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 NELFCDQ8IXH7 590 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 SENP8Q96LD8 212 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 CYP4F11Q9HBI6 524 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 DSEQ9UL01 958 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 MAFFQ9ULX9 164 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 TRAF3IP3Q9Y228 551 aa20.19■□□□□ 0.82
PKD1-223ENST00000561668 ANO9A1A5B4 782 aa20.18■□□□□ 0.82
PKD1-223ENST00000561668 PRR33A8MZF0 331 aa20.18■□□□□ 0.82
PKD1-223ENST00000561668 CCL16O15467 120 aa20.18■□□□□ 0.82
PKD1-223ENST00000561668 TBC1D4O60343 1298 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms