RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 GRXCR2A6NFK2 248 aa17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 MBTPS2O43462 519 aa17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 TGM5O43548 720 aa17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 ODC1P11926 461 aa17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 OR1D2P34982 312 aa17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 BFSP1Q12934 665 aa17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 SMAD4Q13485 552 aaKnown RBP17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 SV2CQ496J9 727 aa17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 CTXN3Q4LDR2 81 aa17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 SCARA3Q6AZY7 606 aa17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 USP37Q86T82 979 aa17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 SLC9A9Q8IVB4 645 aa17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 GPR65Q8IYL9 337 aa17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 SMRP1Q8NCR6 262 aa17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 EEF2KMTQ96G04 330 aa17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 SENP8Q96LD8 212 aa17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 DMAC2Q9NW81 257 aa17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 CDH22Q9UJ99 828 aa17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 ITGA11Q9UKX5 1188 aa17.11■□□□□ 0.33
RABGGTA-206ENST00000558649 BRWD1Q9NSI6 2320 aa17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 GOLGA6L22H0YM25 854 aa17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 H7C4K7 107 aa17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 M0QZQ0 153 aa17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 CLSTN1O94985 981 aa17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 WEE2P0C1S8 567 aa17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 BMP1P13497 986 aa17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 AARSP49588 968 aaKnown RBP eCLIP17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 YWHAHQ04917 246 aaPredicted RBP17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 STIM1Q13586 685 aa17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 DUOXA2Q1HG44 320 aa17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 PUS10Q3MIT2 529 aaKnown RBP17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 KLHL10Q6JEL2 608 aa17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 ZNF280DQ6N043 979 aa17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 SYCE2Q6PIF2 218 aa17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 RSPO2Q6UXX9 243 aaPredicted RBP17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 ADAMTS19Q8TE59 1207 aa17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 MFSD14AQ96MC6 490 aa17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 TSG101Q99816 390 aa17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 FAM50BQ9Y247 325 aa17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 USP15Q9Y4E8 981 aaPredicted RBP17.1■□□□□ 0.33
RABGGTA-206ENST00000558649 TRIM49BA6NDI0 452 aa17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 KPNA7A9QM74 516 aa17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 CYB561D2O14569 222 aa17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 HOXB8P17481 243 aaPredicted RBP17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 RPL13P26373 211 aaKnown RBP17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 PNPLA4P41247 253 aa17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 RBP5P82980 135 aa17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 ADAM9Q13443 819 aa17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 ZCWPW2Q504Y3 356 aa17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 ELMSAN1Q6PJG2 1045 aa17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 TMC5Q6UXY8 1006 aa17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 ADSSL1Q8N142 457 aa17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 KREMEN2Q8NCW0 462 aa17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 PLEKHO2Q8TD55 490 aa17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 NECAB3Q96P71 396 aaPredicted RBP17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 GTPBP4Q9BZE4 634 aaKnown RBP17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 GZF1Q9H116 711 aaPredicted RBP17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 CLSTN2Q9H4D0 955 aa17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 SFXN1Q9H9B4 322 aa17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 SIX4Q9UIU6 781 aa17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 FBXL5Q9UKA1 691 aa17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 BACE2Q9Y5Z0 518 aa17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 MTCL1Q9Y4B5 1905 aaKnown RBP17.09■□□□□ 0.33
RABGGTA-206ENST00000558649 LRRIQ3A6PVS8 624 aaPredicted RBP17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 PSMA7O14818 248 aa17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 RFPL2O75678 378 aa17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 AKAP3O75969 853 aa17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 CPB1P15086 417 aa17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 CD44P16070 742 aaKnown RBP17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 PMS1P54277 932 aaKnown RBP17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 DLG4P78352 724 aa17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 ROR1Q01973 937 aa17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 BIRC3Q13489 604 aa17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 MORC3Q14149 939 aa17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 COBLL1Q53SF7 1204 aa17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 OVOS1Q6IE37 1185 aa17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 CES5AQ6NT32 575 aa17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 TRAPPC11Q7Z392 1133 aa17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 FAM186BQ8IYM0 893 aa17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 FEZF2Q8TBJ5 459 aa17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 S1PR5Q9H228 398 aa17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 CTNND2Q9UQB3 1225 aa17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 SPTBN5Q9NRC6 3674 aaKnown RBP17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 C2orf16Q68DN1 1984 aa17.08■□□□□ 0.32
RABGGTA-206ENST00000558649 PHACTR2O75167 634 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 OR4Q2P0C623 313 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 BMP6P22004 513 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 PSMC2P35998 433 aaKnown RBP17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 MYO1EQ12965 1108 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 RAB33AQ14088 237 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 MRPL58Q14197 206 aaKnown RBP17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 MYBPC2Q14324 1141 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 SMAD2Q15796 467 aaKnown RBP17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 NFIL3Q16649 462 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 EDRF1Q3B7T1 1238 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 LIN9Q5TKA1 542 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 ANKRD40Q6AI12 368 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 LILRA6Q6PI73 481 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 METTL23Q86XA0 190 aa17.07■□□□□ 0.32
RABGGTA-206ENST00000558649 LRRC52Q8N7C0 313 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms