RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 ELSPBP1Q96BH3 223 aa12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 KIF12Q96FN5 646 aa12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 FIZ1Q96SL8 496 aa12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 LRRC3Q9BY71 257 aa12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 DNAJC25Q9H1X3 360 aa12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 AFF4Q9UHB7 1163 aaKnown RBP12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 NDRG2Q9UN36 371 aaKnown RBP12.59□□□□□ -0.39
PRPF40B-212ENST00000551111 ANKRD63C9JTQ0 380 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 SPTLC1O15269 473 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 SOAT2O75908 522 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 CPB1P15086 417 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 LRPAP1P30533 357 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 HOXC13P31276 330 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 AARSP49588 968 aaKnown RBP eCLIP12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 SMTNP53814 917 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 PFKPQ01813 784 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 DUSP4Q13115 394 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 KARSQ15046 597 aaKnown RBP12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 RABEP1Q15276 862 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 TEAD2Q15562 447 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 WDR44Q5JSH3 913 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 STXBP5Q5T5C0 1151 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 TPGS2Q68CL5 300 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 SCARA3Q6AZY7 606 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 ZNF280DQ6N043 979 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 USP49Q70CQ1 688 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 GPBP1Q86WP2 473 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 BEST2Q8NFU1 509 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 SHKBP1Q8TBC3 707 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 LRRC3BQ96PB8 259 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 TIPINQ9BVW5 301 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 BCO2Q9BYV7 579 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 SLC27A5Q9Y2P5 690 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 ANAPC1Q9H1A4 1944 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 EML5Q05BV3 1969 aa12.58□□□□□ -0.4
PRPF40B-212ENST00000551111 LAMTOR5O43504 91 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 OAZ2O95190 189 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 CLTAP09496 248 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 MARCKSP29966 332 aaPredicted RBP12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 NMT1P30419 496 aaKnown RBP12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 GDI1P31150 447 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 EPHA5P54756 1037 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 YWHAHQ04917 246 aaPredicted RBP12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 MTAPQ13126 283 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 ZC2HC1CQ53FD0 456 aaPredicted RBP12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 JADE1Q6IE81 842 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 PDZD4Q76G19 769 aaPredicted RBP12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 TMC8Q8IU68 726 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 MAP4K3Q8IVH8 894 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 ATAD1Q8NBU5 361 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 APPL2Q8NEU8 664 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 FAM212AQ96EL1 285 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 BICD1Q96G01 975 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 CDK5RAP3Q96JB5 506 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 ZNF512Q96ME7 567 aaPredicted RBP12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 OSBPL6Q9BZF3 934 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 SEMA4AQ9H3S1 761 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 BRD9Q9H8M2 597 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 PLEKHA5Q9HAU0 1116 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 ZFP14Q9HCL3 533 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 ZNF334Q9HCZ1 680 aaPredicted RBP12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 TBX20Q9UMR3 447 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 YIPF1Q9Y548 306 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 SPAG17Q6Q759 2223 aa12.57□□□□□ -0.4
PRPF40B-212ENST00000551111 GREB1Q4ZG55 1949 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 A0A0B4J269 797 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 A0A1W2PRU2 124 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 H3BQV1 296 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 OGTO15294 1046 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 ADRB2P07550 413 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 NFICP08651 508 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 PLCG1P19174 1290 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 LIG4P49917 911 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 ZNF131P52739 623 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 GAS6Q14393 721 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 CYP4A22Q5TCH4 519 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 ARL6IP4Q66PJ3 421 aaKnown RBP12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 ZNF852Q6ZMS4 543 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 MYCT1Q8N699 235 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 ZSWIM2Q8NEG5 633 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 ZSCAN18Q8TBC5 510 aaPredicted RBP12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 NELL1Q92832 810 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 SMARCD2Q92925 531 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 FAM84AQ96KN4 292 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 MKNK1Q9BUB5 465 aa12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 TRMT61BQ9BVS5 477 aaKnown RBP12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 LARSQ9P2J5 1176 aaKnown RBP12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 UBQLN1Q9UMX0 589 aaKnown RBP12.56□□□□□ -0.4
PRPF40B-212ENST00000551111 NCOR2Q9Y618 2525 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 MYO16Q9Y6X6 1858 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 MED19A0JLT2 244 aaPredicted RBP12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 HEPACAM2A8MVW5 462 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 K7ENM7 598 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 ARNTLO00327 626 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 ZNF197O14709 1029 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 HNRNPDLO14979 420 aaKnown RBP12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 MICAL2O94851 1124 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 PIGRP01833 764 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 TDGF1P13385 188 aa12.55□□□□□ -0.4
PRPF40B-212ENST00000551111 PSMC3P17980 439 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms