RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 GPC5P78333 572 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 GPR17Q13304 367 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 PLD1Q13393 1074 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 MYBPC2Q14324 1141 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 OVOS1Q6IE37 1185 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 SLC39A4Q6P5W5 647 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 STXBP4Q6ZWJ1 553 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 PDZD4Q76G19 769 aaPredicted RBP10.15□□□□□ -0.78
YBX3-218ENST00000546298 NT5DC4Q86YG4 428 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 CCDC105Q8IYK2 499 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 SYCP3Q8IZU3 236 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 DTWD2Q8NBA8 298 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 POMGNT1Q8WZA1 660 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 FGF14Q92915 247 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 MCRS1Q96EZ8 462 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 CORO1BQ9BR76 489 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 PANK2Q9BZ23 570 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 TBC1D17Q9HA65 648 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 OLFML3Q9NRN5 406 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 DSEQ9UL01 958 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 CA14Q9ULX7 337 aa10.15□□□□□ -0.78
YBX3-218ENST00000546298 KRBA1A5PL33 1030 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 MYMKA6NI61 221 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 SPTLC2O15270 562 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 PI15O43692 258 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 GCNT3O95395 438 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 LDHAP00338 332 aaKnown RBP10.14□□□□□ -0.79
YBX3-218ENST00000546298 NFICP08651 508 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 ODC1P11926 461 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 GUCY2FP51841 1108 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 EPHB3P54753 998 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 LILRA4P59901 499 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 AMPD3Q01432 767 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 PRKCQQ04759 706 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 TWF1Q12792 350 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 L1TD1Q5T7N2 865 aaKnown RBP10.14□□□□□ -0.79
YBX3-218ENST00000546298 C9orf57Q5W0N0 161 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 RNF19BQ6ZMZ0 732 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 METTL23Q86XA0 190 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 HSCBQ8IWL3 235 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 CCDC65Q8IXS2 484 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 THEM5Q8N1Q8 247 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 LINC00301Q8NCQ3 95 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 ING5Q8WYH8 240 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 DNAJC19Q96DA6 116 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 SENP8Q96LD8 212 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 RPP25Q9BUL9 199 aaKnown RBP10.14□□□□□ -0.79
YBX3-218ENST00000546298 GPR88Q9GZN0 384 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 TMEM206Q9H813 350 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 ZFP14Q9HCL3 533 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 ASAH2Q9NR71 780 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 PANK4Q9NVE7 773 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 DPP3Q9NY33 737 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 SIT1Q9Y3P8 196 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 TIMM13Q9Y5L4 95 aaPredicted RBP10.14□□□□□ -0.79
YBX3-218ENST00000546298 ZNF318Q5VUA4 2279 aa10.14□□□□□ -0.79
YBX3-218ENST00000546298 REV3LO60673 3130 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 ANO9A1A5B4 782 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 PROB1E7EW31 1015 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 PIRO00625 290 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 KIAA0391O15091 583 aaKnown RBP10.13□□□□□ -0.79
YBX3-218ENST00000546298 PPP6R2O75170 966 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 PPP1R37O75864 691 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 YEATS4O95619 227 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 MYL4P12829 197 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 GARTP22102 1010 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 PNPLA4P41247 253 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 NBL1P41271 181 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 ALDH1A3P47895 512 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 TAF6P49848 677 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 STARD6P59095 220 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 SMARCB1Q12824 385 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 MLF2Q15773 248 aaPredicted RBP10.13□□□□□ -0.79
YBX3-218ENST00000546298 SLC5A9Q2M3M2 681 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 SLC44A4Q53GD3 710 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 PDILTQ8N807 584 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 ST13P5Q8NFI4 369 aaPredicted RBP10.13□□□□□ -0.79
YBX3-218ENST00000546298 CACTINQ8WUQ7 758 aaKnown RBP10.13□□□□□ -0.79
YBX3-218ENST00000546298 NELL2Q99435 816 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 PHOX2BQ99453 314 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 KXD1Q9BQD3 176 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 STRA6Q9BX79 667 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 CUEDC2Q9H467 287 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 FAM86C1Q9NVL1 165 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 TBC1D7Q9P0N9 293 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 CEP72Q9P209 647 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 HSFX1Q9UBD0 423 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 YIPF1Q9Y548 306 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 ASB3Q9Y575 518 aa10.13□□□□□ -0.79
YBX3-218ENST00000546298 XIRP2A4UGR9 3374 aa10.12□□□□□ -0.79
YBX3-218ENST00000546298 TDRD15B5MCY1 1934 aaKnown RBP10.12□□□□□ -0.79
YBX3-218ENST00000546298 KANSL1LA0AUZ9 987 aa10.12□□□□□ -0.79
YBX3-218ENST00000546298 FRMD3A2A2Y4 597 aa10.12□□□□□ -0.79
YBX3-218ENST00000546298 TISP43B9A030 160 aa10.12□□□□□ -0.79
YBX3-218ENST00000546298 TULP1O00294 542 aaPredicted RBP10.12□□□□□ -0.79
YBX3-218ENST00000546298 PPEF2O14830 753 aa10.12□□□□□ -0.79
YBX3-218ENST00000546298 GFRA3O60609 400 aa10.12□□□□□ -0.79
YBX3-218ENST00000546298 CUTAO60888 179 aa10.12□□□□□ -0.79
YBX3-218ENST00000546298 FGF19O95750 216 aa10.12□□□□□ -0.79
YBX3-218ENST00000546298 CYP11A1P05108 521 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms