RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 FER1L6Q2WGJ9 1857 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 WDR81Q562E7 1941 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 TLDC2A0PJX2 215 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 FAM170AA1A519 330 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 ZNF862O60290 1169 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 MGRN1O60291 552 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 SORBS3O60504 671 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 PROSCO94903 275 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 TTC4O95801 387 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 DLATP10515 647 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 ZNF16P17020 682 aaPredicted RBP5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 EIF2AK2P19525 551 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 SCP2P22307 547 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 MAPK4P31152 587 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 CHKAP35790 457 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 SCNN1AP37088 669 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 MNAT1P51948 309 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 RPS6P62753 249 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 PPARDQ03181 441 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 CENPCQ03188 943 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 KRT17Q04695 432 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 DMP1Q13316 513 aaPredicted RBP5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 SGO2Q562F6 1265 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 FAM102BQ5T8I3 360 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 PLA2G4FQ68DD2 849 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 CYB5D1Q6P9G0 228 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 ADGRD1Q6QNK2 874 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 VSTM1Q6UX27 236 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 MON1BQ7L1V2 547 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 TAOK1Q7L7X3 1001 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 TAS1R3Q7RTX0 852 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 USP37Q86T82 979 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 LAPTM4BQ86VI4 370 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 FAM228AQ86W67 206 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 ANKMY2Q8IV38 441 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 CCDC50Q8IVM0 306 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 GPD1LQ8N335 351 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 OGFOD1Q8N543 542 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 AGBL3Q8NEM8 1001 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 IPO4Q8TEX9 1081 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 C1orf54Q8WWF1 131 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 ZNF516Q92618 1163 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 GPRASP2Q96D09 838 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 TRIM11Q96F44 468 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 SNF8Q96H20 258 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 PRMT1Q99873 361 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 SELENOSQ9BQE4 189 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 SH2D3AQ9BRG2 576 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 DDX23Q9BUQ8 820 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 KIFC3Q9BVG8 833 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 TRIM7Q9C029 511 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 DCLK3Q9C098 648 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 VPS33BQ9H267 617 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 RAVER2Q9HCJ3 691 aaKnown RBP5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 CHST7Q9NS84 486 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 HOMER3Q9NSC5 361 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 ARHGAP28Q9P2N2 729 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 LGALS13Q9UHV8 139 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 ANAPC7Q9UJX3 599 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 CNTN6Q9UQ52 1028 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 VPS9D1Q9Y2B5 631 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 PTPN22Q9Y2R2 807 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 PCDHB2Q9Y5E7 798 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 PARP14Q460N5 1801 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 UMODL1Q5DID0 1318 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 ADGRA3Q8IWK6 1321 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 SIP14410 1827 aa5.53□□□□□ -1.52
ATPAF1-212ENST00000542495 MAFGO15525 162 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 PSTPIP1O43586 416 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 C21orf2O43822 256 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 SNX3O60493 162 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 RAD17O75943 681 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 TOMM70O94826 608 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 C4BPAP04003 597 aaKnown RBP5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 KCNA2P16389 499 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 ACO1P21399 889 aaKnown RBP5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 RRM1P23921 792 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 ABCD1P33897 745 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 BPIFB4P59827 614 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 PSMD6Q15008 389 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 PPP1R7Q15435 360 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 CCNG2Q16589 344 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 CCDC142Q17RM4 750 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 ZACNQ401N2 412 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 GALNTL6Q49A17 601 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 PREPLQ4J6C6 727 aaPredicted RBP5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 WLSQ5T9L3 541 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 BRICD5Q6PL45 260 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 NSMFQ6X4W1 530 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 OTUD6AQ7L8S5 288 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 VSIG10LQ86VR7 867 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 PHF13Q86YI8 300 aaPredicted RBP5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 KATNAL2Q8IYT4 538 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 RTKN2Q8IZC4 609 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 LARGE2Q8N3Y3 721 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 ANKS4BQ8N8V4 417 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 PLPP7Q8NBV4 271 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 MCPH1Q8NEM0 835 aa5.52□□□□□ -1.53
ATPAF1-212ENST00000542495 ATL2Q8NHH9 583 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms