RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 NEU2Q9Y3R4 380 aa6.99□□□□□ -1.29
CCDC7-209ENST00000539197 ADM5C9JUS6 153 aa6.98□□□□□ -1.29
CCDC7-209ENST00000539197 KCNA2P16389 499 aa6.98□□□□□ -1.29
CCDC7-209ENST00000539197 AMIGO2Q86SJ2 522 aa6.98□□□□□ -1.29
CCDC7-209ENST00000539197 SPATS2Q86XZ4 545 aaKnown RBP6.98□□□□□ -1.29
CCDC7-209ENST00000539197 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.98□□□□□ -1.29
CCDC7-209ENST00000539197 TOR1AIP2Q8NFQ8 470 aa6.98□□□□□ -1.29
CCDC7-209ENST00000539197 MYCBPAPQ8TBZ2 947 aa6.98□□□□□ -1.29
CCDC7-209ENST00000539197 SCARB1Q8WTV0 552 aa6.98□□□□□ -1.29
CCDC7-209ENST00000539197 DPF1Q92782 380 aa6.98□□□□□ -1.29
CCDC7-209ENST00000539197 ST3GAL5Q9UNP4 418 aa6.98□□□□□ -1.29
CCDC7-209ENST00000539197 SETD1BQ9UPS6 1966 aaKnown RBP6.98□□□□□ -1.29
CCDC7-209ENST00000539197 WASHC2AQ641Q2 1341 aa6.98□□□□□ -1.29
CCDC7-209ENST00000539197 MANSC4A6NHS7 340 aaPredicted RBP6.97□□□□□ -1.29
CCDC7-209ENST00000539197 VWC2LB2RUY7 222 aa6.97□□□□□ -1.29
CCDC7-209ENST00000539197 SUN1O94901 812 aa6.97□□□□□ -1.29
CCDC7-209ENST00000539197 CHRM2P08172 466 aa6.97□□□□□ -1.29
CCDC7-209ENST00000539197 MTHFD1P11586 935 aaKnown RBP6.97□□□□□ -1.29
CCDC7-209ENST00000539197 ITGB6P18564 788 aa6.97□□□□□ -1.29
CCDC7-209ENST00000539197 HSD3B2P26439 372 aa6.97□□□□□ -1.29
CCDC7-209ENST00000539197 CNGA1P29973 690 aa6.97□□□□□ -1.29
CCDC7-209ENST00000539197 HNRNPMP52272 730 aaKnown RBP eCLIP6.97□□□□□ -1.292e-6■■■■■ 31.6
CCDC7-209ENST00000539197 SOX10P56693 466 aa6.97□□□□□ -1.29
CCDC7-209ENST00000539197 ZNF844Q08AG5 666 aa6.97□□□□□ -1.29
CCDC7-209ENST00000539197 CLUL1Q15846 466 aa6.97□□□□□ -1.29
CCDC7-209ENST00000539197 IFI44Q8TCB0 444 aa6.97□□□□□ -1.29
CCDC7-209ENST00000539197 PGBD1Q96JS3 809 aa6.97□□□□□ -1.29
CCDC7-209ENST00000539197 ADAM21Q9UKJ8 722 aa6.97□□□□□ -1.29
CCDC7-209ENST00000539197 ZNF81P51508 661 aa6.96□□□□□ -1.3
CCDC7-209ENST00000539197 KLF1Q13351 362 aaPredicted RBP6.96□□□□□ -1.3
CCDC7-209ENST00000539197 PTPRRQ15256 657 aa6.96□□□□□ -1.3
CCDC7-209ENST00000539197 KIAA1614Q5VZ46 1190 aa6.96□□□□□ -1.3
CCDC7-209ENST00000539197 SDE2Q6IQ49 451 aa6.96□□□□□ -1.3
CCDC7-209ENST00000539197 RSPH3Q86UC2 560 aa6.96□□□□□ -1.3
CCDC7-209ENST00000539197 TMIEQ8NEW7 156 aa6.96□□□□□ -1.3
CCDC7-209ENST00000539197 ZNF778Q96MU6 729 aa6.96□□□□□ -1.3
CCDC7-209ENST00000539197 LINC00473A8K010 186 aa6.95□□□□□ -1.3
CCDC7-209ENST00000539197 KRTAP29-1A8MX34 341 aaPredicted RBP6.95□□□□□ -1.3
CCDC7-209ENST00000539197 PPP3CBP16298 524 aa6.95□□□□□ -1.3
CCDC7-209ENST00000539197 WASP42768 502 aa6.95□□□□□ -1.3
CCDC7-209ENST00000539197 EXOSC10Q01780 885 aaKnown RBP6.95□□□□□ -1.3
CCDC7-209ENST00000539197 DYRK1AQ13627 763 aa6.95□□□□□ -1.3
CCDC7-209ENST00000539197 PABPC1LQ4VXU2 614 aaKnown RBP6.95□□□□□ -1.3
CCDC7-209ENST00000539197 AMOTL1Q8IY63 956 aa6.95□□□□□ -1.3
CCDC7-209ENST00000539197 ADGRG5Q8IZF4 528 aa6.95□□□□□ -1.3
CCDC7-209ENST00000539197 HASPINQ8TF76 798 aa6.95□□□□□ -1.3
CCDC7-209ENST00000539197 C1QTNF7Q9BXJ2 289 aa6.95□□□□□ -1.3
CCDC7-209ENST00000539197 TDP1Q9NUW8 608 aa6.95□□□□□ -1.3
CCDC7-209ENST00000539197 SAP30BPQ9UHR5 308 aaKnown RBP6.95□□□□□ -1.3
CCDC7-209ENST00000539197 ITPKBP27987 946 aa6.94□□□□□ -1.3
CCDC7-209ENST00000539197 ANXA11P50995 505 aaKnown RBP6.94□□□□□ -1.3
CCDC7-209ENST00000539197 IL10RAQ13651 578 aa6.94□□□□□ -1.3
CCDC7-209ENST00000539197 TXNRD1Q16881 649 aa6.94□□□□□ -1.3
CCDC7-209ENST00000539197 PREPLQ4J6C6 727 aaPredicted RBP6.94□□□□□ -1.3
CCDC7-209ENST00000539197 KRT26Q7Z3Y9 468 aa6.94□□□□□ -1.3
CCDC7-209ENST00000539197 C1QL2Q7Z5L3 287 aa6.94□□□□□ -1.3
CCDC7-209ENST00000539197 JADE3Q92613 823 aa6.94□□□□□ -1.3
CCDC7-209ENST00000539197 IMPG2Q9BZV3 1241 aa6.94□□□□□ -1.3
CCDC7-209ENST00000539197 WNT6Q9Y6F9 365 aa6.94□□□□□ -1.3
CCDC7-209ENST00000539197 KAT6AQ92794 2004 aa6.93□□□□□ -1.3
CCDC7-209ENST00000539197 WDR91A4D1P6 747 aa6.93□□□□□ -1.3
CCDC7-209ENST00000539197 K7ESF4 209 aa6.93□□□□□ -1.3
CCDC7-209ENST00000539197 TOR1BO14657 336 aa6.93□□□□□ -1.3
CCDC7-209ENST00000539197 NDUFS2O75306 463 aa6.93□□□□□ -1.3
CCDC7-209ENST00000539197 VIL1P09327 827 aaKnown RBP6.93□□□□□ -1.3
CCDC7-209ENST00000539197 C5AR1P21730 350 aa6.93□□□□□ -1.3
CCDC7-209ENST00000539197 IARSP41252 1262 aaKnown RBP6.93□□□□□ -1.3
CCDC7-209ENST00000539197 C3orf36Q3SXR2 165 aa6.93□□□□□ -1.3
CCDC7-209ENST00000539197 MIGA2Q7L4E1 593 aa6.93□□□□□ -1.3
CCDC7-209ENST00000539197 CFAP52Q8N1V2 620 aa6.93□□□□□ -1.3
CCDC7-209ENST00000539197 PDPRQ8NCN5 879 aa6.93□□□□□ -1.3
CCDC7-209ENST00000539197 ATL2Q8NHH9 583 aa6.93□□□□□ -1.3
CCDC7-209ENST00000539197 SSH1Q8WYL5 1049 aa6.93□□□□□ -1.3
CCDC7-209ENST00000539197 PACSIN1Q9BY11 444 aa6.93□□□□□ -1.3
CCDC7-209ENST00000539197 JKAMPQ9P055 326 aa6.93□□□□□ -1.3
CCDC7-209ENST00000539197 LIMCH1Q9UPQ0 1083 aa6.93□□□□□ -1.3
CCDC7-209ENST00000539197 CCDC195A0A1B0GUA6 201 aa6.92□□□□□ -1.3
CCDC7-209ENST00000539197 PRKCGP05129 697 aa6.92□□□□□ -1.3
CCDC7-209ENST00000539197 CD1AP06126 327 aa6.92□□□□□ -1.3
CCDC7-209ENST00000539197 EDNRBP24530 442 aa6.92□□□□□ -1.3
CCDC7-209ENST00000539197 CDC42EP1Q00587 391 aa6.92□□□□□ -1.3
CCDC7-209ENST00000539197 RNF219Q5W0B1 726 aaPredicted RBP6.92□□□□□ -1.3
CCDC7-209ENST00000539197 FCRLBQ6BAA4 426 aa6.92□□□□□ -1.3
CCDC7-209ENST00000539197 PGM2L1Q6PCE3 622 aa6.92□□□□□ -1.3
CCDC7-209ENST00000539197 TMPRSS9Q7Z410 1059 aa6.92□□□□□ -1.3
CCDC7-209ENST00000539197 CBARPQ8N350 705 aaPredicted RBP6.92□□□□□ -1.3
CCDC7-209ENST00000539197 CNTD1Q8N815 330 aa6.92□□□□□ -1.3
CCDC7-209ENST00000539197 SLC17A8Q8NDX2 589 aa6.92□□□□□ -1.3
CCDC7-209ENST00000539197 IL17RDQ8NFM7 739 aa6.92□□□□□ -1.3
CCDC7-209ENST00000539197 SNX19Q92543 992 aa6.92□□□□□ -1.3
CCDC7-209ENST00000539197 AOX1Q06278 1338 aa6.92□□□□□ -1.3
CCDC7-209ENST00000539197 PHLDB1Q86UU1 1377 aa6.92□□□□□ -1.3
CCDC7-209ENST00000539197 TRIM75PA6NK02 468 aa6.91□□□□□ -1.3
CCDC7-209ENST00000539197 E9PLN8 166 aa6.91□□□□□ -1.3
CCDC7-209ENST00000539197 SLC43A1O75387 559 aa6.91□□□□□ -1.3
CCDC7-209ENST00000539197 CELA2AP08217 269 aa6.91□□□□□ -1.3
CCDC7-209ENST00000539197 PIGFQ07326 219 aa6.91□□□□□ -1.3
CCDC7-209ENST00000539197 FAM153CQ494X1 144 aa6.91□□□□□ -1.3
CCDC7-209ENST00000539197 RASAL3Q86YV0 1011 aa6.91□□□□□ -1.3
CCDC7-209ENST00000539197 B3GALNT2Q8NCR0 500 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms