RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 ZNF280CQ8ND82 737 aa19.06■□□□□ 0.64
RAB40C-203ENST00000535977 PABPC3Q9H361 631 aaKnown RBP19.06■□□□□ 0.64
RAB40C-203ENST00000535977 CNOT7Q9UIV1 285 aaKnown RBP19.06■□□□□ 0.64
RAB40C-203ENST00000535977 ZMYND8Q9ULU4 1186 aaPredicted RBP19.06■□□□□ 0.64
RAB40C-203ENST00000535977 FER1L6Q2WGJ9 1857 aa19.06■□□□□ 0.64
RAB40C-203ENST00000535977 IFNAR2P48551 515 aa19.06■□□□□ 0.64
RAB40C-203ENST00000535977 CUL3Q13618 768 aa19.06■□□□□ 0.64
RAB40C-203ENST00000535977 ADAT2Q7Z6V5 191 aaKnown RBP19.06■□□□□ 0.64
RAB40C-203ENST00000535977 SLC13A5Q86YT5 568 aaPredicted RBP19.06■□□□□ 0.64
RAB40C-203ENST00000535977 REPS2Q8NFH8 660 aa19.06■□□□□ 0.64
RAB40C-203ENST00000535977 TAS1R2Q8TE23 839 aa19.06■□□□□ 0.64
RAB40C-203ENST00000535977 DDX1Q92499 740 aaKnown RBP19.06■□□□□ 0.64
RAB40C-203ENST00000535977 TRIM31Q9BZY9 425 aa19.06■□□□□ 0.64
RAB40C-203ENST00000535977 JPH1Q9HDC5 661 aaPredicted RBP19.06■□□□□ 0.64
RAB40C-203ENST00000535977 PICK1Q9NRD5 415 aa19.06■□□□□ 0.64
RAB40C-203ENST00000535977 INTS9Q9NV88 658 aaKnown RBP19.06■□□□□ 0.64
RAB40C-203ENST00000535977 SLC9A2Q9UBY0 812 aa19.06■□□□□ 0.64
RAB40C-203ENST00000535977 PNMA3Q9UL41 463 aa19.06■□□□□ 0.64
RAB40C-203ENST00000535977 ATP8A1Q9Y2Q0 1164 aa19.06■□□□□ 0.64
RAB40C-203ENST00000535977 HNRNPDLO14979 420 aaKnown RBP19.05■□□□□ 0.64
RAB40C-203ENST00000535977 SNX3O60493 162 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 GNAZP19086 355 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 DSG3P32926 999 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 PMS2P54278 862 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 LBRQ14739 615 aaKnown RBP19.05■□□□□ 0.64
RAB40C-203ENST00000535977 CLEC16AQ2KHT3 1053 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 SLC39A4Q6P5W5 647 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 CYFIP1Q7L576 1253 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 C12orf50Q8NA57 414 aaPredicted RBP19.05■□□□□ 0.64
RAB40C-203ENST00000535977 GLG1Q92896 1179 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 AVENQ9NQS1 362 aaPredicted RBP19.05■□□□□ 0.64
RAB40C-203ENST00000535977 ARHGAP28Q9P2N2 729 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 ABLIM1O14639 778 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 EXTL3O43909 919 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 ZNF862O60290 1169 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 CLDN10P78369 228 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 XKR3Q5GH77 459 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 SNRNP48Q6IEG0 339 aaKnown RBP19.05■□□□□ 0.64
RAB40C-203ENST00000535977 SWSAP1Q6NVH7 229 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 CCDC137Q6PK04 289 aaKnown RBP19.05■□□□□ 0.64
RAB40C-203ENST00000535977 BSNDQ8WZ55 320 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 BICD1Q96G01 975 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 NSRP1Q9H0G5 558 aaKnown RBP19.05■□□□□ 0.64
RAB40C-203ENST00000535977 CYP26B1Q9NR63 512 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 C1orf112Q9NSG2 853 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 PCMTD2Q9NV79 361 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 BCS1LQ9Y276 419 aa19.05■□□□□ 0.64
RAB40C-203ENST00000535977 SLC1A1P43005 524 aa19.04■□□□□ 0.64
RAB40C-203ENST00000535977 DALRD3Q5D0E6 543 aaKnown RBP19.04■□□□□ 0.64
RAB40C-203ENST00000535977 WDR44Q5JSH3 913 aa19.04■□□□□ 0.64
RAB40C-203ENST00000535977 PPP1R2P3Q6NXS1 205 aa19.04■□□□□ 0.64
RAB40C-203ENST00000535977 ASRGL1Q7L266 308 aa19.04■□□□□ 0.64
RAB40C-203ENST00000535977 TRMT1LQ7Z2T5 733 aaKnown RBP19.04■□□□□ 0.64
RAB40C-203ENST00000535977 RIPK3Q9Y572 518 aa19.04■□□□□ 0.64
RAB40C-203ENST00000535977 PCDHB2Q9Y5E7 798 aa19.04■□□□□ 0.64
RAB40C-203ENST00000535977 OAS1P00973 400 aaKnown RBP19.04■□□□□ 0.64
RAB40C-203ENST00000535977 PYGMP11217 842 aa19.04■□□□□ 0.64
RAB40C-203ENST00000535977 COILP38432 576 aaPredicted RBP19.04■□□□□ 0.64
RAB40C-203ENST00000535977 SGSM1Q2NKQ1 1148 aa19.04■□□□□ 0.64
RAB40C-203ENST00000535977 RNF220Q5VTB9 566 aa19.04■□□□□ 0.64
RAB40C-203ENST00000535977 HHATQ5VTY9 493 aa19.04■□□□□ 0.64
RAB40C-203ENST00000535977 DENND2CQ68D51 928 aa19.04■□□□□ 0.64
RAB40C-203ENST00000535977 TMEM154Q6P9G4 183 aa19.04■□□□□ 0.64
RAB40C-203ENST00000535977 APLFQ8IW19 511 aaPredicted RBP19.04■□□□□ 0.64
RAB40C-203ENST00000535977 C18orf8Q96DM3 657 aa19.04■□□□□ 0.64
RAB40C-203ENST00000535977 POP1Q99575 1024 aaKnown RBP19.04■□□□□ 0.64
RAB40C-203ENST00000535977 KIFC3Q9BVG8 833 aa19.04■□□□□ 0.64
RAB40C-203ENST00000535977 PASKQ96RG2 1323 aa19.04■□□□□ 0.64
RAB40C-203ENST00000535977 GRIN3BO60391 1043 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 PLTPP55058 493 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 POLE2P56282 527 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 DGKZQ13574 1117 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 LRRC23Q53EV4 343 aaPredicted RBP19.03■□□□□ 0.64
RAB40C-203ENST00000535977 ABHD15Q6UXT9 468 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 C15orf39Q6ZRI6 1047 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 SLCO2A1Q92959 643 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 LRRC19Q9H756 370 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 HACL1Q9UJ83 578 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 SNX24Q9Y343 169 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 USP15Q9Y4E8 981 aaPredicted RBP19.03■□□□□ 0.64
RAB40C-203ENST00000535977 DOCK1Q14185 1865 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 SPATA31C2B4DYI2 1134 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 ATP6V1C1P21283 382 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 SP100P23497 879 aaPredicted RBP19.03■□□□□ 0.64
RAB40C-203ENST00000535977 MAN1A1P33908 653 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 PSMD6Q15008 389 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 SLFN12LQ6IEE8 588 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 CCDC105Q8IYK2 499 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 PGM2Q96G03 612 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 ACAD9Q9H845 621 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 STYXL1Q9Y6J8 313 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 PARP14Q460N5 1801 aa19.03■□□□□ 0.64
RAB40C-203ENST00000535977 TLDC2A0PJX2 215 aa19.02■□□□□ 0.64
RAB40C-203ENST00000535977 FSCN2O14926 492 aa19.02■□□□□ 0.64
RAB40C-203ENST00000535977 WFS1O76024 890 aa19.02■□□□□ 0.64
RAB40C-203ENST00000535977 FAM163BP0C2L3 166 aa19.02■□□□□ 0.64
RAB40C-203ENST00000535977 DLATP10515 647 aaKnown RBP19.02■□□□□ 0.64
RAB40C-203ENST00000535977 KRT5P13647 590 aa19.02■□□□□ 0.64
RAB40C-203ENST00000535977 PTPRAP18433 802 aa19.02■□□□□ 0.64
RAB40C-203ENST00000535977 ACTR2P61160 394 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms