RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 LMAN2Q12907 356 aa15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 MRPL58Q14197 206 aaKnown RBP15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 GLRA4Q5JXX5 417 aa15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 PPP4R3CPQ6ZMV5 832 aa15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 NOSTRINQ8IVI9 506 aa15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 CCDC148Q8NFR7 591 aa15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 PRIMPOLQ96LW4 560 aa15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 UROC1Q96N76 676 aa15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 LSG1Q9H089 658 aaKnown RBP15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 PDZD7Q9H5P4 517 aa15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 CCDC86Q9H6F5 360 aaKnown RBP15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 SCUBE2Q9NQ36 999 aa15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 RGL1Q9NZL6 768 aa15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 AFF4Q9UHB7 1163 aaKnown RBP15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 MAFFQ9ULX9 164 aa15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 CFAP46Q8IYW2 2715 aa15.29■□□□□ 0.04
NKX3-1-202ENST00000523261 TRIP11Q15643 1979 aa15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 H7C4K7 107 aa15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 SLC37A4O43826 429 aa15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 PRB1P04280 392 aa15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 MAPK8P45983 427 aa15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 NECTIN1Q15223 517 aa15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 ZNF423Q2M1K9 1284 aa15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 TRIM61Q5EBN2 209 aa15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 MOXD1Q6UVY6 613 aa15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 SYT13Q7L8C5 426 aa15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 C11orf74Q86VG3 221 aa15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 BPIFB1Q8TDL5 484 aa15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 PIGKQ92643 395 aa15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 SLKQ9H2G2 1235 aaPredicted RBP15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 FBRSL1Q9HCM7 1045 aaKnown RBP15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 PRMT7Q9NVM4 692 aaPredicted RBP15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 VPS54Q9P1Q0 977 aa15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 RAXQ9Y2V3 346 aa15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 YIPF1Q9Y548 306 aa15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 PI4KAP42356 2102 aa15.28■□□□□ 0.04
NKX3-1-202ENST00000523261 ZNF462Q96JM2 2506 aa15.27■□□□□ 0.04
NKX3-1-202ENST00000523261 URB1O60287 2271 aaKnown RBP15.27■□□□□ 0.04
NKX3-1-202ENST00000523261 SYN3O14994 580 aa15.27■□□□□ 0.04
NKX3-1-202ENST00000523261 N4BP3O15049 544 aa15.27■□□□□ 0.04
NKX3-1-202ENST00000523261 PRAMEF12O95522 483 aa15.27■□□□□ 0.04
NKX3-1-202ENST00000523261 BCKDHBP21953 392 aa15.27■□□□□ 0.04
NKX3-1-202ENST00000523261 DGKEP52429 567 aa15.27■□□□□ 0.04
NKX3-1-202ENST00000523261 DMC1Q14565 340 aa15.27■□□□□ 0.04
NKX3-1-202ENST00000523261 PTPAQ15257 358 aa15.27■□□□□ 0.04
NKX3-1-202ENST00000523261 EPHA7Q15375 998 aa15.27■□□□□ 0.04
NKX3-1-202ENST00000523261 C22orf23Q9BZE7 217 aa15.27■□□□□ 0.04
NKX3-1-202ENST00000523261 DNAJC25Q9H1X3 360 aa15.27■□□□□ 0.04
NKX3-1-202ENST00000523261 FZD8Q9H461 694 aa15.27■□□□□ 0.04
NKX3-1-202ENST00000523261 ZSWIM4Q9H7M6 989 aa15.27■□□□□ 0.04
NKX3-1-202ENST00000523261 KCNMB3Q9NPA1 279 aa15.27■□□□□ 0.04
NKX3-1-202ENST00000523261 DDX25Q9UHL0 483 aaKnown RBP15.27■□□□□ 0.04
NKX3-1-202ENST00000523261 TPCN1Q9ULQ1 816 aa15.27■□□□□ 0.04
NKX3-1-202ENST00000523261 GDAQ9Y2T3 454 aa15.27■□□□□ 0.04
NKX3-1-202ENST00000523261 GON4LQ3T8J9 2241 aa15.27■□□□□ 0.03
NKX3-1-202ENST00000523261 PLXNB3Q9ULL4 1909 aa15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 CCDC196A0A1B0GTZ2 297 aa15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 OTOL1A6NHN0 477 aaPredicted RBP15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 C1QL1O75973 258 aa15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 ENGP17813 658 aa15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 DHPSP49366 369 aaPredicted RBP15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 MCM2P49736 904 aa15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 SOX4Q06945 474 aaPredicted RBP15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 CTTNQ14247 550 aaKnown RBP15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 FAM187BQ17R55 369 aa15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 CTXN3Q4LDR2 81 aa15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 USP39Q53GS9 565 aaKnown RBP15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 GAREM2Q75VX8 874 aa15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 RPLP0P6Q8NHW5 317 aa15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 MDM1Q8TC05 714 aa15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 DYDC2Q96IM9 177 aa15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 NUSAP1Q9BXS6 441 aaKnown RBP15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 POLR3FQ9H1D9 316 aaPredicted RBP15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 HPS4Q9NQG7 708 aa15.26■□□□□ 0.03
NKX3-1-202ENST00000523261 KIAA1549LQ6ZVL6 1849 aa15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 TNRC6BQ9UPQ9 1833 aaKnown RBP15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 LRRIQ4A6NIV6 560 aa15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 DGAT1O75907 488 aa15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 VNN2O95498 520 aa15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 CYP4A11Q02928 519 aa15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 RUNX3Q13761 415 aa15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 GPR158Q5T848 1215 aa15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 EEF1DP3Q658K8 133 aa15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 CCNI2Q6ZMN8 369 aaPredicted RBP15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 RNF19BQ6ZMZ0 732 aa15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 DAGLBQ8NCG7 672 aa15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 BEST2Q8NFU1 509 aa15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 FAM20AQ96MK3 541 aa15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 FAM83CQ9BQN1 747 aa15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 TPSD1Q9BZJ3 242 aa15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 GKN1Q9NS71 199 aa15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 NAP1L2Q9ULW6 460 aaPredicted RBP15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 USP20Q9Y2K6 914 aa15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 HECTD1Q9ULT8 2610 aa15.25■□□□□ 0.03
NKX3-1-202ENST00000523261 PLA2G2AP14555 144 aa15.24■□□□□ 0.03
NKX3-1-202ENST00000523261 CPB1P15086 417 aa15.24■□□□□ 0.03
NKX3-1-202ENST00000523261 DRD1P21728 446 aa15.24■□□□□ 0.03
NKX3-1-202ENST00000523261 WEE1P30291 646 aa15.24■□□□□ 0.03
NKX3-1-202ENST00000523261 FBXO43Q4G163 708 aa15.24■□□□□ 0.03
NKX3-1-202ENST00000523261 CDCA2Q69YH5 1023 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms