RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 ZNF865P0CJ78 1059 aaPredicted RBP19.53■□□□□ 0.72
SDC2-202ENST00000518385 PSMD6Q15008 389 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 GJC2Q5T442 439 aaPredicted RBP19.53■□□□□ 0.72
SDC2-202ENST00000518385 DUPD1Q68J44 220 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 DAAM2Q86T65 1068 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 RHOT2Q8IXI1 618 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 FBXL13Q8NEE6 735 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 PPTC7Q8NI37 304 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 PSPC1Q8WXF1 523 aaKnown RBP19.53■□□□□ 0.72
SDC2-202ENST00000518385 CCT6BQ92526 530 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 SAAL1Q96ER3 474 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 ERP44Q9BS26 406 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 DDX47Q9H0S4 455 aaKnown RBP19.53■□□□□ 0.72
SDC2-202ENST00000518385 PABPC3Q9H361 631 aaKnown RBP19.53■□□□□ 0.72
SDC2-202ENST00000518385 CENPHQ9H3R5 247 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 PACSIN2Q9UNF0 486 aaPredicted RBP19.53■□□□□ 0.72
SDC2-202ENST00000518385 A0A1B0GUA9 196 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 LRRIQ4A6NIV6 560 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 DDX3XO00571 662 aaKnown RBP eCLIP19.53■□□□□ 0.721e-25■■■■□ 20.9
SDC2-202ENST00000518385 DAPK3O43293 454 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 SCTRP47872 440 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 HTRA3P83110 453 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 TNFAIP2Q03169 654 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 ENOX2Q16206 610 aaKnown RBP19.53■□□□□ 0.72
SDC2-202ENST00000518385 CTNNBL1Q8WYA6 563 aaPredicted RBP19.53■□□□□ 0.72
SDC2-202ENST00000518385 OSBPL7Q9BZF2 842 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 C2orf40Q9H1Z8 148 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 DONSONQ9NYP3 566 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 MTRF1LQ9UGC7 380 aaKnown RBP19.53■□□□□ 0.72
SDC2-202ENST00000518385 AGO2Q9UKV8 859 aaKnown RBP19.53■□□□□ 0.72
SDC2-202ENST00000518385 GABRQQ9UN88 632 aa19.53■□□□□ 0.72
SDC2-202ENST00000518385 MGRN1O60291 552 aa19.52■□□□□ 0.71
SDC2-202ENST00000518385 TNFAIP3P21580 790 aa19.52■□□□□ 0.71
SDC2-202ENST00000518385 CHRNA3P32297 505 aa19.52■□□□□ 0.71
SDC2-202ENST00000518385 MMP13P45452 471 aa19.52■□□□□ 0.71
SDC2-202ENST00000518385 MAGOHP61326 146 aaKnown RBP19.52■□□□□ 0.71
SDC2-202ENST00000518385 DENND2CQ68D51 928 aa19.52■□□□□ 0.71
SDC2-202ENST00000518385 MAGOHBQ96A72 148 aaKnown RBP19.52■□□□□ 0.71
SDC2-202ENST00000518385 ROPN1BQ9BZX4 212 aaPredicted RBP19.52■□□□□ 0.71
SDC2-202ENST00000518385 ROPN1Q9HAT0 212 aaPredicted RBP19.52■□□□□ 0.71
SDC2-202ENST00000518385 CCT8L1PA6NM43 557 aa19.51■□□□□ 0.71
SDC2-202ENST00000518385 FOXN3O00409 490 aaPredicted RBP19.51■□□□□ 0.71
SDC2-202ENST00000518385 FLT3LGP49771 235 aa19.51■□□□□ 0.71
SDC2-202ENST00000518385 DNA2P51530 1060 aa19.51■□□□□ 0.71
SDC2-202ENST00000518385 DR1Q01658 176 aa19.51■□□□□ 0.71
SDC2-202ENST00000518385 CDCA2Q69YH5 1023 aaPredicted RBP19.51■□□□□ 0.71
SDC2-202ENST00000518385 C11orf63Q6NUN7 778 aa19.51■□□□□ 0.71
SDC2-202ENST00000518385 TAOK1Q7L7X3 1001 aa19.51■□□□□ 0.71
SDC2-202ENST00000518385 ZBTB8OSQ8IWT0 167 aa19.51■□□□□ 0.71
SDC2-202ENST00000518385 GBP7Q8N8V2 638 aaPredicted RBP19.51■□□□□ 0.71
SDC2-202ENST00000518385 ZSWIM2Q8NEG5 633 aa19.51■□□□□ 0.71
SDC2-202ENST00000518385 AFG1LQ8WV93 481 aa19.51■□□□□ 0.71
SDC2-202ENST00000518385 CCDC127Q96BQ5 260 aa19.51■□□□□ 0.71
SDC2-202ENST00000518385 NT5C1BQ96P26 610 aa19.51■□□□□ 0.71
SDC2-202ENST00000518385 FAM213AQ9BRX8 229 aa19.51■□□□□ 0.71
SDC2-202ENST00000518385 RAB20Q9NX57 234 aa19.51■□□□□ 0.71
SDC2-202ENST00000518385 AMACRQ9UHK6 382 aa19.51■□□□□ 0.71
SDC2-202ENST00000518385 A0A0B4J269 797 aa19.5■□□□□ 0.71
SDC2-202ENST00000518385 AP3M2P53677 418 aa19.5■□□□□ 0.71
SDC2-202ENST00000518385 CAP1Q01518 475 aa19.5■□□□□ 0.71
SDC2-202ENST00000518385 MAP2K1Q02750 393 aaPredicted RBP19.5■□□□□ 0.71
SDC2-202ENST00000518385 CAPSQ13938 189 aa19.5■□□□□ 0.71
SDC2-202ENST00000518385 TFDP1Q14186 410 aa19.5■□□□□ 0.71
SDC2-202ENST00000518385 ARHGAP44Q17R89 818 aa19.5■□□□□ 0.71
SDC2-202ENST00000518385 ZNF484Q5JVG2 852 aa19.5■□□□□ 0.71
SDC2-202ENST00000518385 C15orf39Q6ZRI6 1047 aa19.5■□□□□ 0.71
SDC2-202ENST00000518385 GPIHBP1Q8IV16 184 aa19.5■□□□□ 0.71
SDC2-202ENST00000518385 FAM71AQ8IYT1 594 aa19.5■□□□□ 0.71
SDC2-202ENST00000518385 U2AF1L4Q8WU68 220 aaKnown RBP19.5■□□□□ 0.71
SDC2-202ENST00000518385 PRPF31Q8WWY3 499 aaKnown RBP19.5■□□□□ 0.71
SDC2-202ENST00000518385 FNBP1Q96RU3 617 aa19.5■□□□□ 0.71
SDC2-202ENST00000518385 AGPAT1Q99943 283 aa19.5■□□□□ 0.71
SDC2-202ENST00000518385 AP1M1Q9BXS5 423 aa19.5■□□□□ 0.71
SDC2-202ENST00000518385 NEUROG2Q9H2A3 272 aa19.5■□□□□ 0.71
SDC2-202ENST00000518385 ERAP1Q9NZ08 941 aa19.5■□□□□ 0.71
SDC2-202ENST00000518385 BCCIPQ9P287 314 aaKnown RBP eCLIP19.5■□□□□ 0.71
SDC2-202ENST00000518385 GNEQ9Y223 722 aaKnown RBP19.5■□□□□ 0.71
SDC2-202ENST00000518385 ZSWIM8A7E2V4 1837 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 ANKRD62A6NC57 917 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 DDX3YO15523 660 aaKnown RBP19.49■□□□□ 0.71
SDC2-202ENST00000518385 TTI1O43156 1089 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 ADCY6O43306 1168 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 HOXD8P13378 290 aaPredicted RBP19.49■□□□□ 0.71
SDC2-202ENST00000518385 ATP5DP30049 168 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 ELF1P32519 619 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 PMS2P54278 862 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 GALCP54803 685 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 GCNT1Q02742 428 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 POU5F1BQ06416 359 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 TRADDQ15628 312 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 SV2AQ7L0J3 742 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 PIGWQ7Z7B1 504 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 ARHGEF19Q8IW93 802 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 UBL4BQ8N7F7 174 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 OR6J1Q8NGC5 347 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 SHC3Q92529 594 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 DHX38Q92620 1227 aaKnown RBP19.49■□□□□ 0.71
SDC2-202ENST00000518385 MRPL4Q9BYD3 311 aaKnown RBP19.49■□□□□ 0.71
SDC2-202ENST00000518385 ZDHHC18Q9NUE0 388 aa19.49■□□□□ 0.71
SDC2-202ENST00000518385 SAMD15Q9P1V8 674 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms