RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 TEX33O43247 280 aa12.88□□□□□ -0.35
PCDHGA6-201ENST00000517434 DUX4L2P0CJ85 424 aa12.88□□□□□ -0.35
PCDHGA6-201ENST00000517434 DUX4L3P0CJ86 424 aa12.88□□□□□ -0.35
PCDHGA6-201ENST00000517434 DUX4L4P0CJ87 422 aa12.88□□□□□ -0.35
PCDHGA6-201ENST00000517434 DUX4L5P0CJ88 424 aa12.88□□□□□ -0.35
PCDHGA6-201ENST00000517434 DUX4L6P0CJ89 424 aa12.88□□□□□ -0.35
PCDHGA6-201ENST00000517434 DUX4L7P0CJ90 424 aa12.88□□□□□ -0.35
PCDHGA6-201ENST00000517434 MRPL28Q13084 256 aaKnown RBP12.88□□□□□ -0.35
PCDHGA6-201ENST00000517434 TSTA3Q13630 321 aaPredicted RBP12.88□□□□□ -0.35
PCDHGA6-201ENST00000517434 NOTUMQ6P988 496 aa12.88□□□□□ -0.35
PCDHGA6-201ENST00000517434 CCSER1Q9C0I3 900 aa12.88□□□□□ -0.35
PCDHGA6-201ENST00000517434 DUX4Q9UBX2 424 aa12.88□□□□□ -0.35
PCDHGA6-201ENST00000517434 GTPBP10A4D1E9 387 aaKnown RBP12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 C16orf96A6NNT2 1141 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 IL1R1P14778 569 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 SCTRP47872 440 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 TOB2Q14106 344 aaPredicted RBP12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 EFHC2Q5JST6 749 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 CCDC80Q76M96 950 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 STAG2Q8N3U4 1231 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 OR9Q1Q8NGQ5 310 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 ATP6V1E2Q96A05 226 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 KCNK16Q96T55 309 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 FAM217BQ9NTX9 383 aaPredicted RBP12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 ADA2Q9NZK5 511 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 POLLQ9UGP5 575 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 DNAJC12Q9UKB3 198 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 PDXKO00764 312 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 FAM200BP0CF97 657 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 DCAF4L1Q3SXM0 396 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 KLC3Q6P597 504 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 ADCK1Q86TW2 530 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 DEPDC1BQ8WUY9 529 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 PRMT6Q96LA8 375 aaPredicted RBP12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 SUN2Q9UH99 717 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 L1RE1Q9UN81 338 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 FIS1Q9Y3D6 152 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 SFI1A8K8P3 1242 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 TJP3O95049 919 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 MUTP22033 750 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 ATP2C1P98194 919 aaPredicted RBP12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 SV2CQ496J9 727 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 ARMCX6Q7L4S7 300 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 CD302Q8IX05 232 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 L3MBTL1Q9Y468 752 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 BCL9O00512 1426 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 SALL1Q9NSC2 1324 aa12.87□□□□□ -0.35
PCDHGA6-201ENST00000517434 H3BRJ5 948 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 CAND2O75155 1236 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 KRT7P08729 469 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 TRIM59Q8IWR1 403 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 MIEF2Q96C03 454 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 RICTORQ6R327 1708 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 POTEFA5A3E0 1075 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 LRRC53A6NM62 1247 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 POTEIP0CG38 1075 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 PPATQ06203 517 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 INAQ16352 499 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 LRRC36Q1X8D7 754 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 POTEGQ6S5H5 508 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 POTEEQ6S8J3 1075 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 CFAP36Q96G28 342 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 COL5A2P05997 1499 aaPredicted RBP12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 H7C4K7 107 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 PRRG1O14668 218 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 BNIP3LO60238 219 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 CDH16O75309 829 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 DDNO94850 711 aaPredicted RBP12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 TDP2O95551 362 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 CTSHP09668 335 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 IL10P22301 178 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 NOGQ13253 232 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 PDIA6Q15084 440 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 TMTC4Q5T4D3 741 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 PRAMEF18Q5VWM3 479 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 SDE2Q6IQ49 451 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 WDR93Q6P2C0 686 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 TRAF7Q6Q0C0 670 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 KIRREL3Q8IZU9 778 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 DPF3Q92784 378 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 WDR35Q9P2L0 1181 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 TJP2Q9UDY2 1190 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 MAP2P11137 1827 aaKnown RBP12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 FOXP2O15409 715 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 OAZ1P54368 228 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 TMEM132DQ14C87 1099 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 EMC2Q15006 297 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 ITPRIPL1Q6GPH6 555 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 TMEM270Q6UE05 265 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 GMCL1Q96IK5 515 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 ARHGAP23Q9P227 1491 aa12.86□□□□□ -0.35
PCDHGA6-201ENST00000517434 SKAP2O75563 359 aaPredicted RBP12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 ALDH7A1P49419 539 aaKnown RBP12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 ELAVL2Q12926 359 aaKnown RBP12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 TRIM67Q6ZTA4 783 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 HORMAD1Q86X24 394 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 SH3GL1Q99961 368 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 KLC2Q9H0B6 622 aa12.85□□□□□ -0.35
PCDHGA6-201ENST00000517434 CYP26B1Q9NR63 512 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms