RNA–Protein interactions for RNA: ENST00000513042.6

ARHGEF28-212, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF28, Length 6,273 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-212ENST00000513042 TMEM154Q6P9G4 183 aa18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 LVRNQ6Q4G3 990 aa18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 C16orf89Q6UX73 402 aa18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 PRPF39Q86UA1 669 aaKnown RBP18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 TMCO5AQ8N6Q1 288 aa18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 CPA2P48052 419 aa18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 CSE1LP55060 971 aaKnown RBP18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 ARHGAP18Q8N392 663 aa18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 NEDD1Q8NHV4 660 aa18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 THAP11Q96EK4 314 aa18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 SHCBP1LQ9BZQ2 653 aa18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 SMG5Q9UPR3 1016 aaKnown RBP18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 USP15Q9Y4E8 981 aaPredicted RBP18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 APOA1P02647 267 aa18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 RBP5P82980 135 aa18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 PLOD1Q02809 727 aaPredicted RBP18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 BAATQ14032 418 aaPredicted RBP18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 EMC2Q15006 297 aa18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 EME1Q96AY2 570 aa18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 PAWRQ96IZ0 340 aaKnown RBP18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 GOLPH3Q9H4A6 298 aa18.17■□□□□ 0.5
ARHGEF28-212ENST00000513042 ITGA8P53708 1063 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 TTC39BQ5VTQ0 682 aaPredicted RBP18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 E4F1Q66K89 784 aaPredicted RBP18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 OLFML2BQ68BL8 750 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 ERP27Q96DN0 273 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 RFX7Q2KHR2 1363 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 SLC9A1P19634 815 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 FXR1P51114 621 aaKnown RBP eCLIP18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 MED21Q13503 144 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 LRIG3Q6UXM1 1119 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 RINLQ6ZS11 566 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 DDX42Q86XP3 938 aaKnown RBP eCLIP18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 PRDM15P57071 1507 aaPredicted RBP18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 ITIH2P19823 946 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 SERPINB10P48595 397 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 MAP3K10Q02779 954 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 BRINP3Q76B58 766 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 SGMS1Q86VZ5 419 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 LATS2Q9NRM7 1088 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 COMTP21964 271 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 KCNA3P22001 575 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 CENPAP49450 140 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 NUMBP49757 651 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 BYSLQ13895 437 aaKnown RBP18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 C3orf62Q6ZUJ4 267 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 NSUN4Q96CB9 384 aaKnown RBP18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 XPO1O14980 1071 aaKnown RBP18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 KCNQ2O43526 872 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 FAM117BQ6P1L5 589 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 HORMAD1Q86X24 394 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 ADSSL1Q8N142 457 aa18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 FAM32AQ9Y421 112 aaKnown RBP18.16■□□□□ 0.5
ARHGEF28-212ENST00000513042 BTKQ06187 659 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 TBL3Q12788 808 aaKnown RBP18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 TRADDQ15628 312 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 C7orf25Q9BPX7 421 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 EIF3HO15372 352 aaKnown RBP eCLIP18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 PDIA5Q14554 519 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 NBPF20Q3BBV1 942 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 HS6ST3Q8IZP7 471 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 TSPAN17Q96FV3 270 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 FLT1P17948 1338 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 BRD2P25440 801 aaKnown RBP18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 ATG9AQ7Z3C6 839 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 SHCBP1Q8NEM2 672 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 VPS50Q96JG6 964 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 ZNF556Q9HAH1 456 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 ARHGAP31Q2M1Z3 1444 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 EXOSC10Q01780 885 aaKnown RBP18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 CHI3L2Q15782 390 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 LRRC71Q8N4P6 559 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 FAM71DQ8N9W8 422 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 ZNF609O15014 1411 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 FAM47DPA6NHR8 397 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 PIGHQ14442 188 aaPredicted RBP18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 PLEKHM3Q6ZWE6 761 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 XPO6Q96QU8 1125 aaKnown RBP18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 MED15Q96RN5 788 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 CAPN10Q9HC96 672 aa18.15■□□□□ 0.5
ARHGEF28-212ENST00000513042 DYNC1LI2O43237 492 aaPredicted RBP18.14■□□□□ 0.5
ARHGEF28-212ENST00000513042 PSMD3O43242 534 aa18.14■□□□□ 0.5
ARHGEF28-212ENST00000513042 WBP4O75554 376 aaKnown RBP18.14■□□□□ 0.5
ARHGEF28-212ENST00000513042 KRT8P05787 483 aa18.14■□□□□ 0.5
ARHGEF28-212ENST00000513042 JAMLQ86YT9 394 aa18.14■□□□□ 0.5
ARHGEF28-212ENST00000513042 FOPNLQ96NB1 174 aa18.14■□□□□ 0.5
ARHGEF28-212ENST00000513042 ISCA1Q9BUE6 129 aa18.14■□□□□ 0.5
ARHGEF28-212ENST00000513042 ALDH8A1Q9H2A2 487 aaPredicted RBP18.14■□□□□ 0.5
ARHGEF28-212ENST00000513042 PNPLA7Q6ZV29 1317 aa18.14■□□□□ 0.5
ARHGEF28-212ENST00000513042 ZBTB39O15060 712 aa18.14■□□□□ 0.49
ARHGEF28-212ENST00000513042 MAFGO15525 162 aa18.14■□□□□ 0.49
ARHGEF28-212ENST00000513042 IMPDH2P12268 514 aa18.14■□□□□ 0.49
ARHGEF28-212ENST00000513042 GTF2H1P32780 548 aa18.14■□□□□ 0.49
ARHGEF28-212ENST00000513042 TWF1Q12792 350 aa18.14■□□□□ 0.49
ARHGEF28-212ENST00000513042 SGSM1Q2NKQ1 1148 aa18.14■□□□□ 0.49
ARHGEF28-212ENST00000513042 FUT11Q495W5 492 aa18.14■□□□□ 0.49
ARHGEF28-212ENST00000513042 RASGRP2Q7LDG7 609 aa18.14■□□□□ 0.49
ARHGEF28-212ENST00000513042 SRPK1Q96SB4 655 aaKnown RBP18.14■□□□□ 0.49
ARHGEF28-212ENST00000513042 UVRAGQ9P2Y5 699 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms