RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 CCDC141Q6ZP82 1450 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 SHANK2Q9UPX8 1470 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 ARHGAP5Q13017 1502 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 ABCA9Q8IUA7 1624 aa5.36□□□□□ -1.55
HMGB3P13-201ENST00000511263 ZCCHC11Q5TAX3 1644 aaKnown RBP5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 ARHGEF5Q12774 1597 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 ADGRL1O94910 1474 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 CCDC144AA2RUR9 1427 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 C9orf84Q5VXU9 1444 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 KIF15Q9NS87 1388 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 GAGE12BA1L429 117 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 GAGE12HA6NDE8 117 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 ADCY6O43306 1168 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 DHX16O60231 1041 aaKnown RBP5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 STC2O76061 302 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 POMCP01189 267 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 CT47B1P0C2W7 299 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 MAKP20794 623 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 SREBF1P36956 1147 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 CD151P48509 253 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 SCNN1GP51170 649 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 IRX1P78414 480 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 LSM12Q3MHD2 195 aaKnown RBP5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 BRDTQ58F21 947 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 Q6ZRM9 215 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 RHOT1Q8IXI2 618 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 AOPEPQ8N6M6 819 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 NRG4Q8WWG1 115 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 TEKT5Q96M29 485 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 NDC1Q9BTX1 674 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 TEX13AQ9BXU3 409 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 ASPSCR1Q9BZE9 553 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 CCDC8Q9H0W5 538 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 TMX4Q9H1E5 349 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 FAM30AQ9NZY2 134 aa5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 CFAP20Q9Y6A4 193 aaKnown RBP5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 DDX49Q9Y6V7 483 aaKnown RBP5.35□□□□□ -1.55
HMGB3P13-201ENST00000511263 CFAP43Q8NDM7 1665 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 ATP10AO60312 1499 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 CAMSAP2Q08AD1 1489 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 TRAPPC8Q9Y2L5 1435 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 ZMYM3Q14202 1370 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 RPGRIP1LQ68CZ1 1315 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 KLRG2A4D1S0 409 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 SCAF4O95104 1147 aaKnown RBP5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 PEX19P40855 299 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 NEK2P51955 445 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 CDC42EP1Q00587 391 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 KIF23Q02241 960 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 PPP3CAQ08209 521 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 ABHD18Q0P651 414 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 RAB39AQ14964 217 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 HSP90AB2PQ58FF8 381 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 JAKMIP3Q5VZ66 844 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 OTUD7BQ6GQQ9 843 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 ZNF280DQ6N043 979 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 KRBA2Q6ZNG9 492 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 Q6ZVL8 140 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 GPRIN1Q7Z2K8 1008 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 TTC7BQ86TV6 843 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 PLXDC1Q8IUK5 500 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 NME8Q8N427 588 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 LSM14AQ8ND56 463 aaKnown RBP5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 MYRIPQ8NFW9 859 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 OR10H5Q8NGA6 315 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 IL17DQ8TAD2 202 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 CCHCR1Q8TD31 782 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 SLC25A43Q8WUT9 341 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 HAS1Q92839 578 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 PGBD4Q96DM1 585 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 ZNF503Q96F45 646 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 SLC2A13Q96QE2 648 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 PPP1R9BQ96SB3 815 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 LSM14BQ9BX40 385 aaKnown RBP5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 UBA5Q9GZZ9 404 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 DMRT3Q9NQL9 472 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 DDX56Q9NY93 547 aaKnown RBP5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 STK26Q9P289 416 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 G3BP2Q9UN86 482 aaKnown RBP5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 SORCS3Q9UPU3 1222 aa5.34□□□□□ -1.55
HMGB3P13-201ENST00000511263 PTPN23Q9H3S7 1636 aa5.34□□□□□ -1.56
HMGB3P13-201ENST00000511263 ERBINQ96RT1 1412 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 SYNRGQ9UMZ2 1314 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 ANKRD18BA2A2Z9 1011 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 CXorf49A8MYA2 514 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 RNASET2O00584 256 aaKnown RBP5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 TPD52L2O43399 206 aaKnown RBP5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 ARIH2O95376 493 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 ADH4P08319 380 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 PDGFRBP09619 1106 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 U2AF1L5P0DN76 240 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 ALOX15P16050 662 aaPredicted RBP5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 GUCY1A2P33402 732 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 CBX1P83916 185 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 U2AF1Q01081 240 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 BIRC2Q13490 618 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 RABEP1Q15276 862 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 UAP1L1Q3KQV9 507 aa5.33□□□□□ -1.56
HMGB3P13-201ENST00000511263 PLEKHG6Q3KR16 790 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms