RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 GPR75-ASB3A0A0A6YYF3 556 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 H0YIN7 160 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 ZBTB5O15062 677 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 NPTXRO95502 500 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 TROVE2P10155 538 aaKnown RBP eCLIP8.06□□□□□ -1.129e-6■□□□□ 8.9
NEDD9-208ENST00000504387 ACADSP16219 412 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 ITIH2P19823 946 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 BGNP21810 368 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 ARSEP51690 589 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 YARSP54577 528 aaKnown RBP8.06□□□□□ -1.12
NEDD9-208ENST00000504387 SLC34A1Q06495 639 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 BFSP1Q12934 665 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 TFDP1Q14186 410 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 WDR72Q3MJ13 1102 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 PRR5LQ6MZQ0 368 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 CCDC62Q6P9F0 684 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 PAOXQ6QHF9 649 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 CPXCR1Q8N123 301 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 DRAXINQ8NBI3 349 aaPredicted RBP8.06□□□□□ -1.12
NEDD9-208ENST00000504387 SH3TC2Q8TF17 1288 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 RBM17Q96I25 401 aaKnown RBP8.06□□□□□ -1.12
NEDD9-208ENST00000504387 RILPQ96NA2 401 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 FAM111AQ96PZ2 611 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 C11orf70Q9BRQ4 267 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 SLC13A1Q9BZW2 595 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 KRT82Q9NSB4 513 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 GINM1Q9NU53 330 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.06□□□□□ -1.12
NEDD9-208ENST00000504387 ASB3Q9Y575 518 aa8.06□□□□□ -1.12
NEDD9-208ENST00000504387 NCANO14594 1321 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 E2F8A0AVK6 867 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 SGK1O00141 431 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 LIN7AO14910 233 aaPredicted RBP8.05□□□□□ -1.12
NEDD9-208ENST00000504387 PDE5AO76074 875 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 LYNP07948 512 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 MYL2P10916 166 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 ZNF543Q08ER8 600 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 MOGSQ13724 837 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 ACAP1Q15027 740 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 PDCD2Q16342 344 aaPredicted RBP8.05□□□□□ -1.12
NEDD9-208ENST00000504387 BBS9Q3SYG4 887 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 ASPRV1Q53RT3 343 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 TNFAIP8L3Q5GJ75 292 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 C1orf146Q5VVC0 180 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 IRGCQ6NXR0 463 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 RGS9BPQ6ZS82 235 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 CEP128Q6ZU80 1094 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 CROCCP2Q86T23 111 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 TRABD2AQ86V40 505 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 FNBP1Q96RU3 617 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 TMEM121Q9BTD3 319 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 TRAIPQ9BWF2 469 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 TMEM120AQ9BXJ8 343 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 NMUR2Q9GZQ4 415 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 WNT8AQ9H1J5 351 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 PARVGQ9HBI0 331 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 GPRC5CQ9NQ84 441 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 NENFQ9UMX5 172 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 BCORQ6W2J9 1755 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 CLRN2A0PK11 232 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 MSH4O15457 936 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 CREB3O43889 395 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 MAP3K6O95382 1288 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 CFHP08603 1231 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 IVDP26440 423 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 TM4SF1P30408 202 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 INHBCP55103 352 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 SOX10P56693 466 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 SLC5A9Q2M3M2 681 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 PARP6Q2NL67 630 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 CYFIP1Q7L576 1253 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 SATL1Q86VE3 508 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 ZNF513Q8N8E2 541 aaPredicted RBP8.05□□□□□ -1.12
NEDD9-208ENST00000504387 CEP70Q8NHQ1 597 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 SLC26A7Q8TE54 656 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 EPS8L1Q8TE68 723 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 FAM136AQ96C01 138 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 BTBD10Q9BSF8 475 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 CDCA7Q9BWT1 371 aaPredicted RBP8.05□□□□□ -1.12
NEDD9-208ENST00000504387 EBF3Q9H4W6 596 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 DNPEPQ9ULA0 475 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 GLI3P10071 1580 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 TCP10L2B9ZVM9 353 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 F5H423 210 aaPredicted RBP8.05□□□□□ -1.12
NEDD9-208ENST00000504387 MAGEB3O15480 346 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 CCDC22O60826 627 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 RNASEH1O60930 286 aaKnown RBP8.05□□□□□ -1.12
NEDD9-208ENST00000504387 FAM155BO75949 473 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 MSX2P35548 267 aaPredicted RBP8.05□□□□□ -1.12
NEDD9-208ENST00000504387 RASA3Q14644 834 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 EML3Q32P44 896 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 ZCCHC23Q6ZST2 131 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 FBXO11Q86XK2 927 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 CTAGE3PQ8IX95 158 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 PIP4K2CQ8TBX8 421 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 SEMA4DQ92854 862 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 ZNF184Q99676 751 aaPredicted RBP8.05□□□□□ -1.12
NEDD9-208ENST00000504387 DCLK3Q9C098 648 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 KANSL3Q9P2N6 904 aa8.05□□□□□ -1.12
NEDD9-208ENST00000504387 WRAP73Q9P2S5 460 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms