RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 EBF3Q9H4W6 596 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 FAM124BQ9H5Z6 455 aaPredicted RBP7.41□□□□□ -1.22
HDAC3-206ENST00000471968 HPS4Q9NQG7 708 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 ASAH2Q9NR71 780 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 GKN1Q9NS71 199 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 SUSD2Q9UGT4 822 aa7.41□□□□□ -1.22
HDAC3-206ENST00000471968 A0A1W2PRU2 124 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 ESYT2A0FGR8 921 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 ANTXRLA6NF34 631 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 PARP1P09874 1014 aaKnown RBP7.4□□□□□ -1.22
HDAC3-206ENST00000471968 ITGA4P13612 1032 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 ATP4AP20648 1035 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 MAOBP27338 520 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 MATKP42679 507 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 HSP90AA2PQ14568 343 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-206ENST00000471968 SUZ12Q15022 739 aaKnown RBP7.4□□□□□ -1.22
HDAC3-206ENST00000471968 C1QL3Q5VWW1 255 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 XKR5Q6UX68 686 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 TMEM92Q6UXU6 159 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 CCDC81Q6ZN84 652 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 PTRH1Q86Y79 214 aaKnown RBP7.4□□□□□ -1.22
HDAC3-206ENST00000471968 PNMA1Q8ND90 353 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 SMARCC2Q8TAQ2 1214 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 CCER1Q8TC90 406 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-206ENST00000471968 RHPN1Q8TCX5 695 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 USP33Q8TEY7 942 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 SLC7A3Q8WY07 619 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 EXTL1Q92935 676 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 ZNF512Q96ME7 567 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-206ENST00000471968 ZNF578Q96N58 590 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-206ENST00000471968 PAAF1Q9BRP4 392 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 POLR3CQ9BUI4 534 aaPredicted RBP7.4□□□□□ -1.22
HDAC3-206ENST00000471968 CYP4F11Q9HBI6 524 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 UBN1Q9NPG3 1134 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 ZNF302Q9NR11 478 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 THG1LQ9NWX6 298 aaKnown RBP7.4□□□□□ -1.22
HDAC3-206ENST00000471968 MMP17Q9ULZ9 603 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 PCDHGB2Q9Y5G2 931 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 PHLPP2Q6ZVD8 1323 aa7.4□□□□□ -1.22
HDAC3-206ENST00000471968 APCP25054 2843 aa7.4□□□□□ -1.23
HDAC3-206ENST00000471968 MED13LQ71F56 2210 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 A0A087WZ62 844 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 IGKV6D-21A0A0A0MT36 114 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 BHMG1C9JSJ3 638 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-206ENST00000471968 TRIM66O15016 1216 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 RNF113AO15541 343 aaKnown RBP7.39□□□□□ -1.23
HDAC3-206ENST00000471968 PPFIA2O75334 1257 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 ATG7O95352 703 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 PRAMEF12O95522 483 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 C8BP07358 591 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 SFTPCP11686 197 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 HOXB4P17483 251 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-206ENST00000471968 GRK6P43250 576 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 MCM2P49736 904 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 HLA-BQ31612 363 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 SWSAP1Q6NVH7 229 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 USP17L6PQ6QN14 398 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 SLC36A4Q6YBV0 504 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 LEMD2Q8NC56 503 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 EXOC4Q96A65 974 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 TBC1D32Q96NH3 1257 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 SEC62Q99442 399 aaKnown RBP7.39□□□□□ -1.23
HDAC3-206ENST00000471968 FDXACB1Q9BRP7 624 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-206ENST00000471968 ZKSCAN3Q9BRR0 538 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 PRKRIP1Q9H875 184 aaPredicted RBP7.39□□□□□ -1.23
HDAC3-206ENST00000471968 CEP72Q9P209 647 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 MTRRQ9UBK8 725 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 FTSJ1Q9UET6 329 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 CEP131Q9UPN4 1083 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 PLAAQ9Y263 795 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 INSL5Q9Y5Q6 135 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 UBIAD1Q9Y5Z9 338 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 WNT6Q9Y6F9 365 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 HIVEP3Q5T1R4 2406 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 MED13Q9UHV7 2174 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 PTPRDP23468 1912 aa7.39□□□□□ -1.23
HDAC3-206ENST00000471968 DDX39AO00148 427 aaKnown RBP7.38□□□□□ -1.23
HDAC3-206ENST00000471968 MAFGO15525 162 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 RFPL3O75679 317 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 KIF4AO95239 1232 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 SEC24AO95486 1093 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 PRKCBP05771 671 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 FGRP09769 529 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 RNF224P0DH78 156 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 ARSAP15289 507 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 EPHA5P54756 1037 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 ROR1Q01973 937 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 UBXN11Q5T124 520 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 IL27RAQ6UWB1 636 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 ABHD15Q6UXT9 468 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 STAG2Q8N3U4 1231 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 SMG8Q8ND04 991 aaKnown RBP7.38□□□□□ -1.23
HDAC3-206ENST00000471968 CCDC26Q8TAB7 109 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 ZNF461Q8TAF7 563 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 SSC4DQ8WTU2 575 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 CD101Q93033 1021 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 MTMR8Q96EF0 704 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 ZFRQ96KR1 1074 aaKnown RBP7.38□□□□□ -1.23
HDAC3-206ENST00000471968 FAM20AQ96MK3 541 aa7.38□□□□□ -1.23
HDAC3-206ENST00000471968 SEMA3CQ99985 751 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 405.1 ms