RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 ALG1Q9BT22 464 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 RSRP1Q9BUV0 290 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 PCGF6Q9BYE7 350 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 TMEM9BQ9NQ34 198 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 PDGFCQ9NRA1 345 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 HOMER2Q9NSB8 354 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 ANKMY1Q9P2S6 941 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 DPP7Q9UHL4 492 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 TCFL5Q9UL49 500 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 TMX2Q9Y320 296 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 HEMK1Q9Y5R4 338 aaPredicted RBP4.29□□□□□ -1.72
LRCH3-213ENST00000471667 IRAK3Q9Y616 596 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 MICAL3Q7RTP6 2002 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 MYO7AQ13402 2215 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 MYH2Q9UKX2 1941 aa4.29□□□□□ -1.72
LRCH3-213ENST00000471667 NLRC5Q86WI3 1866 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 FANCIQ9NVI1 1328 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 SSU72P8A0A1W2PR75 194 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 A0A1W2PRG0 241 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 MINDY4BA8MYZ0 360 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 EYA2O00167 538 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 IGSF3O75054 1194 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 EPN2O95208 641 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 CFBP00751 764 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 LINC00271P0C7V0 271 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 ARP10275 920 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 GNAT1P11488 350 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 LAG3P18627 525 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 PPP2R1AP30153 589 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 VIPR1P32241 457 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 PHKA1P46020 1223 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 AFF3P51826 1226 aaKnown RBP4.28□□□□□ -1.72
LRCH3-213ENST00000471667 SIM1P81133 766 aaPredicted RBP4.28□□□□□ -1.72
LRCH3-213ENST00000471667 ADCY1Q08828 1119 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 SNW1Q13573 536 aaKnown RBP4.28□□□□□ -1.72
LRCH3-213ENST00000471667 PWP1Q13610 501 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 HNRNPDQ14103 355 aaKnown RBP4.28□□□□□ -1.72
LRCH3-213ENST00000471667 MVPQ14764 893 aaKnown RBP4.28□□□□□ -1.72
LRCH3-213ENST00000471667 TKFCQ3LXA3 575 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 ARSHQ5FYA8 562 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 GORABQ5T7V8 394 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 TMC5Q6UXY8 1006 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 ZPBP2Q6X784 338 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 ZNF852Q6ZMS4 543 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 SND1Q7KZF4 910 aaKnown RBP eCLIP4.28□□□□□ -1.72
LRCH3-213ENST00000471667 CACNA2D4Q7Z3S7 1137 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 TMC3Q7Z5M5 1100 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 MRPS27Q92552 414 aaKnown RBP4.28□□□□□ -1.72
LRCH3-213ENST00000471667 TRAIPQ9BWF2 469 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 FTHL17Q9BXU8 183 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 CNTD2Q9H8S5 307 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 LTB4R2Q9NPC1 389 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 RTEL1Q9NZ71 1219 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 HDAC6Q9UBN7 1215 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 DDX41Q9UJV9 622 aaKnown RBP4.28□□□□□ -1.72
LRCH3-213ENST00000471667 C2CD3Q4AC94 2353 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 TET1Q8NFU7 2136 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 ITPR1Q14643 2758 aa4.28□□□□□ -1.72
LRCH3-213ENST00000471667 MYH13Q9UKX3 1938 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 C17orf102A2RUQ5 167 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 SLC22A31A6NKX4 558 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 N4BP3O15049 544 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 RRP8O43159 456 aaKnown RBP4.27□□□□□ -1.73
LRCH3-213ENST00000471667 SYPP08247 313 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 CCDC192P0DO97 292 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 TXNP10599 105 aaKnown RBP4.27□□□□□ -1.73
LRCH3-213ENST00000471667 HSPA5P11021 654 aaKnown RBP4.27□□□□□ -1.73
LRCH3-213ENST00000471667 PNLIPP16233 465 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 GARTP22102 1010 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 MPLP40238 635 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 CXCL12P48061 93 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 YBX1P67809 324 aaKnown RBP4.27□□□□□ -1.73
LRCH3-213ENST00000471667 CNTN2Q02246 1040 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 MTAPQ13126 283 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 RASGRF1Q13972 1273 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 KIAA0753Q2KHM9 967 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 UAP1L1Q3KQV9 507 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 BBS9Q3SYG4 887 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 SLC44A4Q53GD3 710 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 FAM83BQ5T0W9 1011 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 CYP26C1Q6V0L0 522 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 C15orf39Q6ZRI6 1047 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 GPR149Q86SP6 731 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 RSPH3Q86UC2 560 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 AMOTL1Q8IY63 956 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 DEFB124Q8NES8 71 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 REPS2Q8NFH8 660 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 PIP4K2CQ8TBX8 421 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 ATP6V0A1Q93050 837 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 PHKBQ93100 1093 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 DACT3Q96B18 629 aaPredicted RBP4.27□□□□□ -1.73
LRCH3-213ENST00000471667 FCRL3Q96P31 734 aaPredicted RBP4.27□□□□□ -1.73
LRCH3-213ENST00000471667 PLCD4Q9BRC7 762 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.27□□□□□ -1.739e-6■■□□□ 11.4
LRCH3-213ENST00000471667 XYLT2Q9H1B5 865 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 RAVER2Q9HCJ3 691 aaKnown RBP4.27□□□□□ -1.73
LRCH3-213ENST00000471667 JADE2Q9NQC1 790 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 RNF146Q9NTX7 359 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 FBXO28Q9NVF7 368 aa4.27□□□□□ -1.73
LRCH3-213ENST00000471667 IFT57Q9NWB7 429 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms