RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 ANKMY2Q8IV38 441 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 STMN2Q93045 179 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 FHDC1Q9C0D6 1143 aaPredicted RBP8.41□□□□□ -1.06
TPM3-215ENST00000469717 EBF3Q9H4W6 596 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 TLE6Q9H808 572 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 PSTPIP2Q9H939 334 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 PPM1HQ9ULR3 514 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 SCN7AQ01118 1682 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 EML1O00423 815 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 TRAFD1O14545 582 aaPredicted RBP8.41□□□□□ -1.06
TPM3-215ENST00000469717 ATP6V1G1O75348 118 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 HAUS5O94927 633 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 PLS3P13797 630 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 ITIH2P19823 946 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 PSMC2P35998 433 aaKnown RBP8.41□□□□□ -1.06
TPM3-215ENST00000469717 OLFML2BQ68BL8 750 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 ALYREFQ86V81 257 aaKnown RBP8.41□□□□□ -1.06
TPM3-215ENST00000469717 PTCD3Q96EY7 689 aaKnown RBP8.41□□□□□ -1.06
TPM3-215ENST00000469717 VPS37BQ9H9H4 285 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 METTL14Q9HCE5 456 aaKnown RBP8.41□□□□□ -1.06
TPM3-215ENST00000469717 CYLDQ9NQC7 956 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 DNM3Q9UQ16 869 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.41□□□□□ -1.06
TPM3-215ENST00000469717 TBCAO75347 108 aaKnown RBP8.41□□□□□ -1.06
TPM3-215ENST00000469717 SORBS2O94875 1100 aaKnown RBP8.41□□□□□ -1.06
TPM3-215ENST00000469717 PGM3O95394 542 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 BMP3P12645 472 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 HSPA6P17066 643 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 RPL13P26373 211 aaKnown RBP8.41□□□□□ -1.06
TPM3-215ENST00000469717 PPP3CAQ08209 521 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 AP1B1Q10567 949 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 P3H1Q32P28 736 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 RAPH1Q70E73 1250 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 SATL1Q86VE3 508 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 NEDD1Q8NHV4 660 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 LMO3Q8TAP4 145 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 DHX38Q92620 1227 aaKnown RBP8.41□□□□□ -1.06
TPM3-215ENST00000469717 SH2D3AQ9BRG2 576 aa8.41□□□□□ -1.06
TPM3-215ENST00000469717 ASCC2Q9H1I8 757 aaPredicted RBP8.41□□□□□ -1.06
TPM3-215ENST00000469717 SMCHD1A6NHR9 2005 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 CLRN2A0PK11 232 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 E5RJQ4 531 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 H3BRJ5 948 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 MAGEB2O15479 319 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 GSTA2P09210 222 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 RALAP11233 206 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 AKR1B1P15121 316 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 HMGB2P26583 209 aaKnown RBP8.4□□□□□ -1.06
TPM3-215ENST00000469717 ANXA13P27216 316 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 CLK2P49760 499 aaKnown RBP8.4□□□□□ -1.06
TPM3-215ENST00000469717 CACNB3P54284 484 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 ZBTB16Q05516 673 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 KIF22Q14807 665 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 LIN52Q52LA3 116 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 NCAPG2Q86XI2 1143 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 SYT2Q8N9I0 419 aaPredicted RBP8.4□□□□□ -1.06
TPM3-215ENST00000469717 EPS8L1Q8TE68 723 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 SMC6Q96SB8 1091 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 ANKRD2Q9GZV1 360 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 MMADHCQ9H3L0 296 aaPredicted RBP8.4□□□□□ -1.06
TPM3-215ENST00000469717 C10orf88Q9H8K7 445 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 ZNF395Q9H8N7 513 aaPredicted RBP8.4□□□□□ -1.06
TPM3-215ENST00000469717 ZWILCHQ9H900 591 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 PHF24Q9UPV7 400 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 EMSYQ7Z589 1322 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 FAM86B1E9PN63 330 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 C2CD2LO14523 706 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 CCDC22O60826 627 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 FAM86B2P0C5J1 330 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 HARSP12081 509 aaKnown RBP8.4□□□□□ -1.06
TPM3-215ENST00000469717 MUTP22033 750 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 TPP2P29144 1249 aaPredicted RBP8.4□□□□□ -1.06
TPM3-215ENST00000469717 SLC45A4Q5BKX6 768 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 PPFIBP2Q8ND30 876 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 SNRNP27Q8WVK2 155 aaKnown RBP8.4□□□□□ -1.06
TPM3-215ENST00000469717 USP6NLQ92738 828 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 HAUS1Q96CS2 278 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 TRAIPQ9BWF2 469 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 DCLK3Q9C098 648 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 WNT8AQ9H1J5 351 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 ARHGEF4Q9NR80 690 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 STX18Q9P2W9 335 aaKnown RBP8.4□□□□□ -1.06
TPM3-215ENST00000469717 HSFX1Q9UBD0 423 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 TCEAL9Q9UHQ7 104 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 CHMP2BQ9UQN3 213 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 MYH11P35749 1972 aa8.4□□□□□ -1.06
TPM3-215ENST00000469717 MAGEB3O15480 346 aa8.4□□□□□ -1.07
TPM3-215ENST00000469717 LDHCP07864 332 aa8.4□□□□□ -1.07
TPM3-215ENST00000469717 BTDP43251 543 aa8.4□□□□□ -1.07
TPM3-215ENST00000469717 CD151P48509 253 aa8.4□□□□□ -1.07
TPM3-215ENST00000469717 NMUR2Q9GZQ4 415 aa8.4□□□□□ -1.07
TPM3-215ENST00000469717 SYNCQ9H7C4 482 aa8.4□□□□□ -1.07
TPM3-215ENST00000469717 ANAPC7Q9UJX3 599 aa8.4□□□□□ -1.07
TPM3-215ENST00000469717 MYOCOSA0A1B0GUC4 107 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 GTPBP10A4D1E9 387 aaKnown RBP8.39□□□□□ -1.07
TPM3-215ENST00000469717 MEI4A8MW99 385 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 PI4K2BG5E9Z4 385 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 FSCN2O14926 492 aa8.39□□□□□ -1.07
TPM3-215ENST00000469717 TPD52L2O43399 206 aaKnown RBP8.39□□□□□ -1.07
TPM3-215ENST00000469717 OPHN1O60890 802 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms