RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 CCDC77Q9BR77 488 aa20.75■□□□□ 0.91
CNEP1R1-203ENST00000458059 APOBEC3GQ9HC16 384 aaKnown RBP20.75■□□□□ 0.91
CNEP1R1-203ENST00000458059 SLC24A3Q9HC58 644 aa20.75■□□□□ 0.91
CNEP1R1-203ENST00000458059 GRID1Q9ULK0 1009 aa20.75■□□□□ 0.91
CNEP1R1-203ENST00000458059 COQ4Q9Y3A0 265 aa20.75■□□□□ 0.91
CNEP1R1-203ENST00000458059 NEU2Q9Y3R4 380 aa20.75■□□□□ 0.91
CNEP1R1-203ENST00000458059 MAPTP10636 758 aaKnown RBP20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 CA4P22748 312 aa20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 RPA3P35244 121 aaPredicted RBP20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 MFSD7Q6UXD7 560 aa20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 EP400NLQ6ZTU2 488 aa20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 KRT27Q7Z3Y8 459 aa20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 C4orf19Q8IY42 314 aa20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 CCDC89Q8N998 374 aa20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 TMEM121Q9BTD3 319 aa20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 RXFP1Q9HBX9 757 aa20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 THSD7AQ9UPZ6 1657 aa20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 NPM3O75607 178 aaKnown RBP20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 KRT1P04264 644 aa20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 STRN3Q13033 797 aa20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 MAMLD1Q13495 774 aa20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 BAATQ14032 418 aaPredicted RBP20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 ZNF268Q14587 947 aaPredicted RBP20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 SMTNL2Q2TAL5 461 aa20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 TRIM68Q6AZZ1 485 aa20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 RHOT1Q8IXI2 618 aa20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 TBC1D22BQ9NU19 505 aa20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 C15orf41Q9Y2V0 281 aa20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 PCDHB2Q9Y5E7 798 aa20.74■□□□□ 0.91
CNEP1R1-203ENST00000458059 FAM47DPA6NHR8 397 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 F8VP50 259 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 CBX6O95503 412 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 KLF1Q13351 362 aaPredicted RBP20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 TLDC1Q6P9B6 456 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 TAS1R3Q7RTX0 852 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 NLRX1Q86UT6 975 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 MIEF2Q96C03 454 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 MFSD14AQ96MC6 490 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 PDCD2LQ9BRP1 358 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 TRABDQ9H4I3 376 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 LTBP4Q8N2S1 1624 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 APBA3O96018 575 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 OVGP1Q12889 678 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 LARGE2Q8N3Y3 721 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 MAGEB18Q96M61 343 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 POLR3FQ9H1D9 316 aaPredicted RBP20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 PHTF1Q9UMS5 762 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 LRRIQ4A6NIV6 560 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 NRLP54845 237 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 IL9RQ01113 521 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 MON1BQ7L1V2 547 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 C7orf43Q8WVR3 580 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 KIAA1586Q9HCI6 787 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 DCTN4Q9UJW0 460 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 IVNS1ABPQ9Y6Y0 642 aa20.73■□□□□ 0.91
CNEP1R1-203ENST00000458059 MTFR1Q15390 333 aa20.72■□□□□ 0.91
CNEP1R1-203ENST00000458059 SLCO2A1Q92959 643 aa20.72■□□□□ 0.91
CNEP1R1-203ENST00000458059 ZNF668Q96K58 619 aaPredicted RBP20.72■□□□□ 0.91
CNEP1R1-203ENST00000458059 ZNF570Q96NI8 536 aa20.72■□□□□ 0.91
CNEP1R1-203ENST00000458059 MCEEQ96PE7 176 aa20.72■□□□□ 0.91
CNEP1R1-203ENST00000458059 SGK1O00141 431 aa20.72■□□□□ 0.91
CNEP1R1-203ENST00000458059 NFX1Q12986 1120 aaKnown RBP20.72■□□□□ 0.91
CNEP1R1-203ENST00000458059 SLC1A5Q15758 541 aa20.72■□□□□ 0.91
CNEP1R1-203ENST00000458059 CYP4A22Q5TCH4 519 aa20.72■□□□□ 0.91
CNEP1R1-203ENST00000458059 LIN9Q5TKA1 542 aa20.72■□□□□ 0.91
CNEP1R1-203ENST00000458059 SCARA5Q6ZMJ2 495 aa20.72■□□□□ 0.91
CNEP1R1-203ENST00000458059 OR5B17Q8NGF7 314 aa20.72■□□□□ 0.91
CNEP1R1-203ENST00000458059 XPNPEP1Q9NQW7 623 aa20.72■□□□□ 0.91
CNEP1R1-203ENST00000458059 NOP53Q9NZM5 478 aaKnown RBP20.72■□□□□ 0.91
CNEP1R1-203ENST00000458059 ZNF541Q9H0D2 1346 aa20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 LRRD1A4D1F6 860 aa20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 NEBLO76041 1014 aa20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 LACTBP83111 547 aaPredicted RBP20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 PDIA2Q13087 525 aaKnown RBP20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 KCNT1Q5JUK3 1230 aa20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 RBBP8NLQ8NC74 664 aaPredicted RBP20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 MAGEC3Q8TD91 643 aa20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 L3MBTL3Q96JM7 780 aaPredicted RBP20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 IFT74Q96LB3 600 aa20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 NKX1-2Q9UD57 310 aaPredicted RBP20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 PRKAG3Q9UGI9 489 aa20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 GCAP28676 217 aa20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 MTMR2Q13614 643 aa20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 CCNG2Q16589 344 aa20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 CCDC60Q8IWA6 550 aaPredicted RBP20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 ANKRD35Q8N283 1001 aa20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 UTP4Q969X6 686 aaKnown RBP20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 TARS2Q9BW92 718 aaKnown RBP20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 TRPC5Q9UL62 973 aaPredicted RBP20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 NUB1Q9Y5A7 615 aa20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 PCDHA10Q9Y5I2 948 aa20.71■□□□□ 0.91
CNEP1R1-203ENST00000458059 VNN1O95497 513 aa20.7■□□□□ 0.9
CNEP1R1-203ENST00000458059 NOMO3P69849 1222 aa20.7■□□□□ 0.9
CNEP1R1-203ENST00000458059 GCNT1Q02742 428 aa20.7■□□□□ 0.9
CNEP1R1-203ENST00000458059 RSBN1LQ6PCB5 846 aaPredicted RBP20.7■□□□□ 0.9
CNEP1R1-203ENST00000458059 MCF2L2Q86YR7 1114 aa20.7■□□□□ 0.9
CNEP1R1-203ENST00000458059 TMEM130Q8N3G9 435 aa20.7■□□□□ 0.9
CNEP1R1-203ENST00000458059 TMC2Q8TDI7 906 aa20.7■□□□□ 0.9
CNEP1R1-203ENST00000458059 PXMP2Q9NR77 195 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms