RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 ELMOD1Q8N336 334 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 LEMD2Q8NC56 503 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 TTC8Q8TAM2 541 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 DEPTORQ8TB45 409 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 LOXL4Q96JB6 756 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 ZFYVE19Q96K21 471 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 LSM14BQ9BX40 385 aaKnown RBP18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 CDT1Q9H211 546 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 TMEM60Q9H2L4 133 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 PTPRHQ9HD43 1115 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 GTSE1Q9NYZ3 720 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 FASNP49327 2511 aaKnown RBP18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 CITO14578 2027 aa18.86■□□□□ 0.61
UBE2D4-209ENST00000454428 ANKRD11Q6UB99 2663 aaPredicted RBP18.85■□□□□ 0.61
UBE2D4-209ENST00000454428 XBP1P17861 261 aa18.85■□□□□ 0.61
UBE2D4-209ENST00000454428 GRM5P41594 1212 aa18.85■□□□□ 0.61
UBE2D4-209ENST00000454428 PON2Q15165 354 aa18.85■□□□□ 0.61
UBE2D4-209ENST00000454428 RALGPS2Q86X27 583 aaPredicted RBP18.85■□□□□ 0.61
UBE2D4-209ENST00000454428 TMEM130Q8N3G9 435 aa18.85■□□□□ 0.61
UBE2D4-209ENST00000454428 C12orf50Q8NA57 414 aaPredicted RBP18.85■□□□□ 0.61
UBE2D4-209ENST00000454428 BEST2Q8NFU1 509 aa18.85■□□□□ 0.61
UBE2D4-209ENST00000454428 GAB3Q8WWW8 586 aa18.85■□□□□ 0.61
UBE2D4-209ENST00000454428 E2F7Q96AV8 911 aa18.85■□□□□ 0.61
UBE2D4-209ENST00000454428 C18orf25Q96B23 403 aaPredicted RBP18.85■□□□□ 0.61
UBE2D4-209ENST00000454428 SUSD3Q96L08 255 aa18.85■□□□□ 0.61
UBE2D4-209ENST00000454428 DNAJC25Q9H1X3 360 aa18.85■□□□□ 0.61
UBE2D4-209ENST00000454428 CRISPLD1Q9H336 500 aa18.85■□□□□ 0.61
UBE2D4-209ENST00000454428 TUFT1Q9NNX1 390 aa18.85■□□□□ 0.61
UBE2D4-209ENST00000454428 SH2B1Q9NRF2 756 aaPredicted RBP18.85■□□□□ 0.61
UBE2D4-209ENST00000454428 TNFSF13BQ9Y275 285 aa18.85■□□□□ 0.61
UBE2D4-209ENST00000454428 PKD1L2Q7Z442 2459 aa18.84■□□□□ 0.61
UBE2D4-209ENST00000454428 A0A1W2PRU2 124 aa18.84■□□□□ 0.61
UBE2D4-209ENST00000454428 CDKL5O76039 1030 aa18.84■□□□□ 0.61
UBE2D4-209ENST00000454428 FDPSP14324 419 aaKnown RBP18.84■□□□□ 0.61
UBE2D4-209ENST00000454428 KRT2P35908 639 aa18.84■□□□□ 0.61
UBE2D4-209ENST00000454428 PXNP49023 591 aaPredicted RBP18.84■□□□□ 0.61
UBE2D4-209ENST00000454428 OSTNP61366 133 aa18.84■□□□□ 0.61
UBE2D4-209ENST00000454428 ARID3BQ8IVW6 561 aaPredicted RBP18.84■□□□□ 0.61
UBE2D4-209ENST00000454428 YAF2Q8IY57 180 aa18.84■□□□□ 0.61
UBE2D4-209ENST00000454428 NACC1Q96RE7 527 aa18.84■□□□□ 0.61
UBE2D4-209ENST00000454428 GPR88Q9GZN0 384 aa18.84■□□□□ 0.61
UBE2D4-209ENST00000454428 SLITRK6Q9H5Y7 841 aa18.84■□□□□ 0.61
UBE2D4-209ENST00000454428 MAFFQ9ULX9 164 aa18.84■□□□□ 0.61
UBE2D4-209ENST00000454428 WASF3Q9UPY6 502 aa18.84■□□□□ 0.61
UBE2D4-209ENST00000454428 YIPF1Q9Y548 306 aa18.84■□□□□ 0.61
UBE2D4-209ENST00000454428 NBEAQ8NFP9 2946 aa18.84■□□□□ 0.61
UBE2D4-209ENST00000454428 SMG1Q96Q15 3661 aaKnown RBP18.83■□□□□ 0.61
UBE2D4-209ENST00000454428 DSPP15924 2871 aaKnown RBP18.83■□□□□ 0.6
UBE2D4-209ENST00000454428 ABLIM1O14639 778 aa18.83■□□□□ 0.6
UBE2D4-209ENST00000454428 KCNE1P15382 129 aa18.83■□□□□ 0.6
UBE2D4-209ENST00000454428 EFNA5P52803 228 aa18.83■□□□□ 0.6
UBE2D4-209ENST00000454428 ZNF280DQ6N043 979 aa18.83■□□□□ 0.6
UBE2D4-209ENST00000454428 CACNA2D4Q7Z3S7 1137 aa18.83■□□□□ 0.6
UBE2D4-209ENST00000454428 DDX12PQ92771 950 aa18.83■□□□□ 0.6
UBE2D4-209ENST00000454428 ACO2Q99798 780 aaKnown RBP18.83■□□□□ 0.6
UBE2D4-209ENST00000454428 POLR3CQ9BUI4 534 aaPredicted RBP18.83■□□□□ 0.6
UBE2D4-209ENST00000454428 TMEM121BQ9BXQ6 578 aaPredicted RBP18.83■□□□□ 0.6
UBE2D4-209ENST00000454428 TM6SF1Q9BZW5 370 aa18.83■□□□□ 0.6
UBE2D4-209ENST00000454428 SLC38A7Q9NVC3 462 aa18.83■□□□□ 0.6
UBE2D4-209ENST00000454428 CNTN3Q9P232 1028 aa18.83■□□□□ 0.6
UBE2D4-209ENST00000454428 ZMIZ1Q9ULJ6 1067 aa18.83■□□□□ 0.6
UBE2D4-209ENST00000454428 ATG2BQ96BY7 2078 aa18.83■□□□□ 0.6
UBE2D4-209ENST00000454428 RPP40O75818 363 aaKnown RBP18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 RPL9P32969 192 aaKnown RBP18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 CACNB1Q02641 598 aaPredicted RBP18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 TNK2Q07912 1038 aa18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 PPP2R5AQ15172 486 aa18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 TCEAL6Q6IPX3 200 aa18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 PSAPL1Q6NUJ1 521 aa18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 UNQ6494/PRO21346Q6UXR6 183 aa18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 GAREM2Q75VX8 874 aa18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 TAS1R3Q7RTX0 852 aa18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 SYNPOQ8N3V7 929 aa18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 TCEAL3Q969E4 200 aa18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 CHFRQ96EP1 664 aa18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 TBC1D32Q96NH3 1257 aa18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 CCDC94Q9BW85 323 aaPredicted RBP18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 TOPORSQ9NS56 1045 aaPredicted RBP18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 POLR3BQ9NW08 1133 aaPredicted RBP18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 ORC3Q9UBD5 711 aaPredicted RBP18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 DAXXQ9UER7 740 aaPredicted RBP18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 TPCN1Q9ULQ1 816 aa18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 NUB1Q9Y5A7 615 aa18.82■□□□□ 0.6
UBE2D4-209ENST00000454428 BTBD18B2RXH4 712 aa18.81■□□□□ 0.6
UBE2D4-209ENST00000454428 GIPC1O14908 333 aa18.81■□□□□ 0.6
UBE2D4-209ENST00000454428 PFKFB2O60825 505 aa18.81■□□□□ 0.6
UBE2D4-209ENST00000454428 OR4Q2P0C623 313 aa18.81■□□□□ 0.6
UBE2D4-209ENST00000454428 YARSP54577 528 aaKnown RBP18.81■□□□□ 0.6
UBE2D4-209ENST00000454428 ECM1Q16610 540 aa18.81■□□□□ 0.6
UBE2D4-209ENST00000454428 ZNF568Q3ZCX4 644 aa18.81■□□□□ 0.6
UBE2D4-209ENST00000454428 KDF1Q8NAX2 398 aaPredicted RBP18.81■□□□□ 0.6
UBE2D4-209ENST00000454428 PDRG1Q9NUG6 133 aa18.81■□□□□ 0.6
UBE2D4-209ENST00000454428 PCDHB8Q9UN66 801 aa18.81■□□□□ 0.6
UBE2D4-209ENST00000454428 FREM2Q5SZK8 3169 aa18.81■□□□□ 0.6
UBE2D4-209ENST00000454428 CCDC163A0A0D9SF12 145 aa18.8■□□□□ 0.6
UBE2D4-209ENST00000454428 ARHGEF35A5YM69 484 aa18.8■□□□□ 0.6
UBE2D4-209ENST00000454428 REC8O95072 547 aa18.8■□□□□ 0.6
UBE2D4-209ENST00000454428 PRAMEF12O95522 483 aa18.8■□□□□ 0.6
UBE2D4-209ENST00000454428 CPB1P15086 417 aa18.8■□□□□ 0.6
UBE2D4-209ENST00000454428 PROZP22891 400 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms