RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 TMCC2O75069 709 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 ZBTB11O95625 1053 aaPredicted RBP11.31□□□□□ -0.6
LINC00342-202ENST00000448494 SLC18A1P54219 525 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 PMS1P54277 932 aaKnown RBP11.31□□□□□ -0.6
LINC00342-202ENST00000448494 NIPAL4Q0D2K0 466 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 CLUL1Q15846 466 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 TIGD2Q4W5G0 525 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 SGO2Q562F6 1265 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 C10orf76Q5T2E6 689 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 CCDC62Q6P9F0 684 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 FBXL19Q6PCT2 694 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 PEX26Q7Z412 305 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 HEATR4Q86WZ0 1026 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 LURAP1LQ8IV03 231 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 LRRC57Q8N9N7 239 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 NCOA7Q8NI08 942 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 C7orf43Q8WVR3 580 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 FBXL18Q96ME1 805 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 AIFM2Q9BRQ8 373 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 S100A14Q9HCY8 104 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 BABAM1Q9NWV8 329 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 HACD3Q9P035 362 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 LGALS13Q9UHV8 139 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 MTMR7Q9Y216 660 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 DIS3Q9Y2L1 958 aaKnown RBP11.31□□□□□ -0.6
LINC00342-202ENST00000448494 NEU2Q9Y3R4 380 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 SQORQ9Y6N5 450 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 A0A0G2JLW4 131 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 TXNDC9O14530 226 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 SIN3BO75182 1162 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 UFL1O94874 794 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 ADSLP30566 484 aaPredicted RBP11.31□□□□□ -0.6
LINC00342-202ENST00000448494 EPS15P42566 896 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 PDE4DQ08499 809 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 STK4Q13043 487 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 DNAJC3Q13217 504 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 SF3B3Q15393 1217 aaKnown RBP11.31□□□□□ -0.6
LINC00342-202ENST00000448494 SLC18A3Q16572 532 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 TXNRD1Q16881 649 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 ZNF568Q3ZCX4 644 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 EGFLAMQ63HQ2 1017 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 FAM91A1Q658Y4 838 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 FAM117BQ6P1L5 589 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 SLC38A6Q8IZM9 456 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 ANKRD35Q8N283 1001 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 PANX3Q96QZ0 392 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 CYTH2Q99418 400 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 DHRS9Q9BPW9 319 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 UBN1Q9NPG3 1134 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 IL20Q9NYY1 176 aa11.31□□□□□ -0.6
LINC00342-202ENST00000448494 FAM47DPA6NHR8 397 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 TRIM75PA6NK02 468 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 POTECB2RU33 542 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 ZNF701M0R085 212 aaPredicted RBP11.3□□□□□ -0.6
LINC00342-202ENST00000448494 CSDE1O75534 798 aaKnown RBP11.3□□□□□ -0.6
LINC00342-202ENST00000448494 TRPA1O75762 1119 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 USP1O94782 785 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 FGFR4P22455 802 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 SLC1A1P43005 524 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 ANTXR2P58335 489 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 PDK4Q16654 411 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 LONRF1Q17RB8 773 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 TDRD12Q587J7 1177 aaKnown RBP11.3□□□□□ -0.6
LINC00342-202ENST00000448494 AKAP4Q5JQC9 854 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 MPRIPQ6WCQ1 1025 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 SLC30A10Q6XR72 485 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 LPCAT2Q7L5N7 544 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 TMPRSS6Q8IU80 811 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 HACE1Q8IYU2 909 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 SRBD1Q8N5C6 995 aaKnown RBP11.3□□□□□ -0.6
LINC00342-202ENST00000448494 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC00342-202ENST00000448494 VGLL2Q8N8G2 317 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 OSBPL8Q9BZF1 889 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 SLC38A10Q9HBR0 1119 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 CD209Q9NNX6 404 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 GRHL1Q9NZI5 618 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 ARMCX3Q9UH62 379 aaPredicted RBP11.3□□□□□ -0.6
LINC00342-202ENST00000448494 CDH7Q9ULB5 785 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 SUGT1Q9Y2Z0 365 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC00342-202ENST00000448494 FRMPD4Q14CM0 1322 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 LRRC37A3O60309 1634 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 CASQ2O14958 399 aaPredicted RBP11.3□□□□□ -0.6
LINC00342-202ENST00000448494 SLC22A1O15245 554 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 TSPAN9O75954 239 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 TM7SF2O76062 418 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 TTLL1O95922 423 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 THRAP10827 490 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 ATP6V1B1P15313 513 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 NAGAP17050 411 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 CES1P23141 567 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 PON1P27169 355 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 SLC5A3P53794 718 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 NCKAP1LP55160 1127 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 SNAPC2Q13487 334 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 DPYSQ14117 519 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 SPARCL1Q14515 664 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 RRP1BQ14684 758 aaKnown RBP11.3□□□□□ -0.6
LINC00342-202ENST00000448494 NTRK3Q16288 839 aa11.3□□□□□ -0.6
LINC00342-202ENST00000448494 NANOGP8Q6NSW7 305 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms