RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 MRPS9P82933 396 aaKnown RBP11.2□□□□□ -0.62
TOP3B-210ENST00000444502 TAOK1Q7L7X3 1001 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 RNF180Q86T96 592 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 TRIM74Q86UV6 250 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 TRIM73Q86UV7 250 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 HSPH1Q92598 858 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 KATNAL1Q9BW62 490 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 TAS2R14Q9NYV8 317 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 ANAPC5Q9UJX4 755 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 TTC7AQ9ULT0 858 aaPredicted RBP11.2□□□□□ -0.62
TOP3B-210ENST00000444502 L3MBTL1Q9Y468 752 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 PI4K2BG5E9Z4 385 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 OPLAHO14841 1288 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 PJA2O43164 708 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 USP2O75604 605 aaPredicted RBP11.2□□□□□ -0.62
TOP3B-210ENST00000444502 NPTXRO95502 500 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 SYF2O95926 243 aaKnown RBP11.2□□□□□ -0.62
TOP3B-210ENST00000444502 SLC4A1P02730 911 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 HSPA6P17066 643 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 PSMA2P25787 234 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 HNRNPH3P31942 346 aaKnown RBP11.2□□□□□ -0.62
TOP3B-210ENST00000444502 CPT1AP50416 773 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 TAF11Q15544 211 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 ZCWPW2Q504Y3 356 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 HGSNATQ68CP4 663 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 ARL10Q8N8L6 244 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 CCT8L2Q96SF2 557 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 MLXIPLQ9NP71 852 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 INTS9Q9NV88 658 aaKnown RBP11.2□□□□□ -0.62
TOP3B-210ENST00000444502 CHCHD3Q9NX63 227 aaKnown RBP11.2□□□□□ -0.62
TOP3B-210ENST00000444502 SSX2IPQ9Y2D8 614 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 FRMPD4Q14CM0 1322 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 SGK1O00141 431 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 TBC1D12O60347 775 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 PGK1P00558 417 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 RFC5P40937 340 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 ATP11AP98196 1134 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 PPP3CAQ08209 521 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 HHATQ5VTY9 493 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 SLC47A2Q86VL8 602 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 NLRP14Q86W24 1093 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 CCDC60Q8IWA6 550 aaPredicted RBP11.2□□□□□ -0.62
TOP3B-210ENST00000444502 RNF139Q8WU17 664 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 CPB2Q96IY4 423 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 PLIN4Q96Q06 1357 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 UBE4BO95155 1302 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 KLRG2A4D1S0 409 aaPredicted RBP11.2□□□□□ -0.62
TOP3B-210ENST00000444502 HLA-DRAP01903 254 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 UBA1P22314 1058 aaKnown RBP11.2□□□□□ -0.62
TOP3B-210ENST00000444502 CCDC38Q502W7 563 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 COBLL1Q53SF7 1204 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 RGMBQ6NW40 437 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 VSIG10LQ86VR7 867 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 LMNTD2Q8IXW0 634 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 GRK7Q8WTQ7 553 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 TATDN2Q93075 761 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 ITFG2Q969R8 447 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 ARHGEF26Q96DR7 871 aa11.2□□□□□ -0.62
TOP3B-210ENST00000444502 HMGB1P1B2RPK0 211 aaPredicted RBP11.19□□□□□ -0.62
TOP3B-210ENST00000444502 PIK3CDO00329 1044 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 RASGRF2O14827 1237 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 PRPSAP2O60256 369 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 TMEM132DQ14C87 1099 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 ACCSLQ4AC99 568 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 MAP7D3Q8IWC1 876 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 DNERQ8NFT8 737 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 TMEM117Q9H0C3 514 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 AHDC1Q5TGY3 1603 aaPredicted RBP11.19□□□□□ -0.62
TOP3B-210ENST00000444502 ANKRD63C9JTQ0 380 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 CPB1P15086 417 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 RFX1P22670 979 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 STX2P32856 288 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 PSMC1P62191 440 aaKnown RBP11.19□□□□□ -0.62
TOP3B-210ENST00000444502 DEFB115Q30KQ5 88 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 SPOPLQ6IQ16 392 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 IRF2BP2Q7Z5L9 587 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 KCTD6Q8NC69 237 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 TSEN2Q8NCE0 465 aaKnown RBP11.19□□□□□ -0.62
TOP3B-210ENST00000444502 ATP6V1G3Q96LB4 118 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 ABHD16BQ9H3Z7 469 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 TMEM8AQ9HCN3 771 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 MAD1L1Q9Y6D9 718 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 STRNO43815 780 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 PFDN1O60925 122 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 GRAP2O75791 330 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 LSP1P33241 339 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 TRADDQ15628 312 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 GKAP1Q5VSY0 366 aaPredicted RBP11.19□□□□□ -0.62
TOP3B-210ENST00000444502 CXCL17Q6UXB2 119 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.19□□□□□ -0.62
TOP3B-210ENST00000444502 SV2AQ7L0J3 742 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 TRIM11Q96F44 468 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 FAM81BQ96LP2 452 aa11.19□□□□□ -0.62
TOP3B-210ENST00000444502 PRMT7Q9NVM4 692 aaPredicted RBP11.19□□□□□ -0.62
TOP3B-210ENST00000444502 PHLDB3Q6NSJ2 640 aa11.18□□□□□ -0.62
TOP3B-210ENST00000444502 TLK2Q86UE8 772 aa11.18□□□□□ -0.62
TOP3B-210ENST00000444502 KCTD17Q8N5Z5 321 aa11.18□□□□□ -0.62
TOP3B-210ENST00000444502 ZC3H15Q8WU90 426 aaKnown RBP11.18□□□□□ -0.62
TOP3B-210ENST00000444502 PORCNQ9H237 461 aa11.18□□□□□ -0.62
TOP3B-210ENST00000444502 ACTR5Q9H9F9 607 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms